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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001599000
- symbol?: ccdA1
- synonym: ccdA2
- description?: thiol-disulfide oxidoreductase-associated membrane protein CcdA2
- thiol-disulfide oxidoreductase-associated membrane protein CcdA2
- cytochrome c-type biogenesis protein CcdA
- Cytochrome c-type biogenesis protein
- cytochrome C biogenesis protein CcdA
- Thiol:disulfide interchange protein DsbD
- Cytochrome c biogenesis protein
- cytochrome C biogenesis protein transmembrane region
- Cytochrome c-type biogenesis protein CcdA-1
- Cytochrome c-type biogenesis protein CcdA homolog, associated with MetSO reductase
- description family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1945984..1946694
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS09155 (ccdA2)
SPN034183:
SPN034183_RS03245 (ccdA2)
SPN994038:
SPN994038_RS03165 (ccdA2)
Taiwan19F-14:
SPT_RS03395 (ccdA2)
TCH8431/19A:
HMPREF0837_RS04565 (ccdA2)
Xen35:
CXP32_RS03300 (ccdA2)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MGHIFFFLSVFLAGILSFFSPCILPLLPVYTGVLLDDKDGAQASSGKFSISVTSLLRTLA
D39 MGHIFFFLSVFLAGILSFFSPCILPLLPVYTGVLLDDKDGAQASSGKFSISVTSLLRTLA
D39V MGHIFFFLSVFLAGILSFFSPCILPLLPVYTGVLLDDKDGAQASSGKFSISVTSLLRTLA
Hungary19A-6 MGHIFFFLSVFLAGILSFFSPCILPLLPVYTGVLLDDKDGAQASSGKFSISVTSLLRTLA
EF3030 MGHIFFFLSVFLAGILSFFSPCILPLLPVYTGVLLDDKDGAQASSGKFSISVTSLLRTLA
************************************************************
TIGR4 FIAGISFIFILLGYGAGFLGDLLYASWFQYLTGAIIILLGLHQMEILHFKGLYKEKRLQL
D39 FIAGISFIFILLGYGAGFLGDLLYASWFQYLTGAIIILLGLHQMEILHFKGLYKEKRLQL
D39V FIAGISFIFILLGYGAGFLGDLLYASWFQYLTGAIIILLGLHQMEILHFKGLYKEKRLQL
Hungary19A-6 FIAGISFIFILLGYGAGFLGDLLYASWFQYLTGAIIILLGLHQMEILHFKGLYKEKRLQL
EF3030 FIAGISFIFILLGYGAGFLGDLLYASWFQYLTGAIIILLGLHQMEILHFKGLYKEKRLQL
************************************************************
TIGR4 QGQGQNGKGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL
D39 QGQGQNGKGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL
D39V QGQGQNGKGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL
Hungary19A-6 QGQGQNGKGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL
EF3030 QGQGQNGKGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL
************************************************************
TIGR4 ALPFLLLALTSSYVLKHFRKLHPYLGILKKVGGFLIIVMGFLVLFGNASILSQLFE
D39 ALPFLLLALTSSYVLKHFRKLHPYLGILKKVGGFLIIVMGFLVLFGNASILSQLFE
D39V ALPFLLLALTSSYVLKHFRKLHPYLGILKKVGGFLIIVMGFLVLFGNASILSQLFE
Hungary19A-6 ALPFLLLALTSSYVLKHFRKLHPYLGILKKVGGFLIIVMGLLVLFGNASILSQLFE
EF3030 ALPFLLLALTSSYVLKHFRKLHPYLGILKKVGGFLIIVMGLLVLFGNASILSQLFE
****************************************:***************