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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001658000
- symbol?: glnP3a
- synonym:
- description?: amino acid ABC transporter permease
- amino acid ABC transporter permease
- ABC transporter membrane-spanning permease - glutamine transport
- putative amino-acid ABC transporter integral membrane protein
- amino acid ABC transporter, permease protein
- polar amino acid ABC transporter permease
- putative glutamine ABC transporter permease
- ABC transporter, permease protein
- ABC transporter
- ABC-type amino acid transport system, permease component
- amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein
- amino acid ABC transporter permease protein
- Glutamine ABC transporter permease GlnP3a
- putative glutamine ABC transporter permease protein GlnM
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2013278..2013949
- occurrence?: in 93% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 ----MVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRILVLAQVATAYIELS
D39 MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS
D39V MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS
Hungary19A-6 ----MVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS
:***************************************** *************
TIGR4 RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIG
D39 RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIG
D39V RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIG
Hungary19A-6 RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIG
************************************************************
TIGR4 LAIGLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLY
D39 LAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLY
D39V LAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLY
Hungary19A-6 LAIGLTPLQVFRYVVLPQATAVVLPSFSANVIFLIKKTSVFSAVALADLMYVAKDLIGLY
*********** **********.*************:***********************
TIGR4 YETDIALAMLVVAYLIMLLPISLVFSWIERRLRHAGFGNPSTLSRK
D39 YETDIALAMLVVAYLIMLLPISLVFSWIERRIRHAGFGNPSTLSRK
D39V YETDIALAMLVVAYLIMLLPISLVFSWIERRIRHAGFGNPSTLSRK
Hungary19A-6 YETDIALAMLVVAYLIMLLPISLVFSWIERRTRHAGFGNPSTLSRK
******************************* **************