Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001674000
- symbol?: manA
- synonym:
- description?: mannose-6-phosphate isomerase, class I
- mannose-6-phosphate isomerase, class I
- mannose-6-phosphate isomerase
- Mannose-6-phosphate isomerase ManA
- Phosphomannose isomerase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2117223..2118167
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS03630 (manA)
(19F)
ATCC 49619:
EL263_RS03645 (manA)
(23F)
ATCC 700669:
SPN23F_RS03370 (manA)
(14)
INV200:
SPNINV200_RS03470 (manA)
(14)
JJA:
SPJ_RS03380 (manA)
(19F)
MDRSPN001:
MDRSPN_RS03075 (manA)
(19A)
SP49:
BMJ42_RS04215 (manA)
(1)
SPN032672:
SPN032672_RS09835 (manA)
(3)
SPN034156:
SPN034156_RS09485 (manA)
(3)
SPN034183:
SPN034183_RS03575 (manA)
(3)
SPN994038:
SPN994038_RS03495 (manA)
(3)
SPN994039:
SPN994039_RS03495 (manA)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSEPLFLQSVMQEKIWGGAKLRDEFGYDIPSEKIGEYWAISAHPNGVSKVANGRYEGTDL
D39 MSEPLFLQSVMQEKIWGGTKLRDEFGYDIPSEKVGEYWAISAHLNGVSKVANGRYEGTDL
D39V MSEPLFLQSVMQEKIWGGTKLRDEFGYDIPSEKVGEYWAISAHLNGVSKVANGRYEGTDL
Hungary19A-6 MSEPLFLQSVMQEKIWGGTKLRDEFGYDIPSEKVGEYWAISAHLNGVSKVANGRYEGTDL
EF3030 MSEPLFLQSVMQEKIWGGTKLRDEFGYDIPSEKVGEYWAISAHLNGVSKVANGRYEGTDL
******************:**************:********* ****************
TIGR4 ATLYAEHRELFGNRPEPVFPLLTKILDANDWLSVQVHPDDAYGLEHEGELGKTECWYIIA
D39 ATLYAEHRELFGNRPEPVFPLLTKILDANDWLSVQVHPDDAYGLEHEGELGKTECWYIIA
D39V ATLYAEHRELFGNRPEPVFPLLTKILDANDWLSVQVHPDDAYGLEHEGELGKTECWYIIA
Hungary19A-6 ATLYAEHRELFGNRPEPVFPLLTKILDANDWLSVQVHPDDAYGLEHEDELGKTECWYIIA
EF3030 ATLYAEHRELFGNRPEPVFPLLTKILDANDWLSVQVHPDDAYGLEHEGELGKTECWYIIA
***********************************************.************
TIGR4 ADEGSEIIYGHNAKSKEELRQQIEDKNWDDLLTKVPVKAGDFFYVPSGTMHAIGAGILIL
D39 ADEGSEIIYGHNAKSKEELRQQIEDKNWDALLTKVPVKAGDFFYVPSGTMHAIGAGILIL
D39V ADEGSEIIYGHNAKSKEELRQQIEDKNWDALLTKVPVKAGDFFYVPSGTMHAIGAGILIL
Hungary19A-6 ADEGSEIIYGHNAKSKEELRQQIEDKNWDDLLTKVPVKAGDFFYVPSGTMHAIGTGILIL
EF3030 ADEGSEIIYGHNAKSKEELRQQIEDKNWDALLTKVPVKAGDFFYVPSGTMHAIGAGILIL
***************************** ************************:*****
TIGR4 ETQQSSDTTYRVYDFDRKDDKGNLRELHLEKSIDVLNIGEPANSRPVTVKADDLRSTLLV
D39 ETQQSSDTTYRVYDFDRKDDKGNLRELHLEKSIDVLNIGEPANSRPVTIKADDLRSTLLV
D39V ETQQSSDTTYRVYDFDRKDDKGNLRELHLEKSIDVLNIGEPANSRPVTIKADDLRSTLLV
Hungary19A-6 ETQQSSDTTYRVYDFDRKDDKGNLRELHLEKSIDVLNIGEPANSRPVTVKADNLRSTLLV
EF3030 ETQQSSDTTYRVYDFDRKDDKGNLRELHLEKSIDVLNIGEPANSRPVTIKADDLRSTLLV
************************************************:***:*******
TIGR4 SNDFFAVYKWEITGKVDFEKTADYSLLSVLAGQGQLTVDGKNYPIQKGSHFILPSDVEAW
D39 SNDFFAVYKWEITGKVNFEKTADYSLLSVLAGQGQLTVDGKNYPIQKGRHFILPSDVESW
D39V SNDFFAVYKWEITGKVNFEKTADYSLLSVLAGQGQLTVDGKNYPIQKGRHFILPSDVESW
Hungary19A-6 SNDFFAVYKWEITGKVDFEKTADYSLLSVLAGQGQLTVDGKNYPIQKGRHFILPSDVESW
EF3030 SNDFFAVYKWEITGKVNFEKTADYSLLSVLAGQGQLTVDGKNYPIQKGSHFILPSDVEAW
****************:******************************* *********:*
TIGR4 TLEGQGLELIVSHP
D39 TLEGQDLELIVSHP
D39V TLEGQDLELIVSHP
Hungary19A-6 TLEGQDLELIVSHP
EF3030 TLEGQGLELIVSHP
*****.********