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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001711000
- symbol?: livJ
- synonym:
- description?: ABC transporter substrate-binding protein
- ABC transporter substrate-binding protein
- branched-chain amino acid ABC transporter, amino acid-binding protein
- ABC transporter substrate-binding protein - branched chain amino acid transport
- branched-chain amino acid ABC transporter substrate-binding protein
- Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
- ABC transporter substrate binding lipoprotein-branched chain amino acid transport
- ABC-type branched-chain amino acid transport systems, periplasmic component
- branched-chain amino acid ABC transporter amino acid-binding protein LivK
- High-affinity leucine-specific transport system, periplasmic binding protein LivJ
- High-affinity leucine-specific transport system,periplasmic binding protein LivK (TC 3.A.1.4.1)
- periplasmic binding family protein
- receptor family ligand-binding protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2068555..2069715
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKKFALSFVALASVALLAACGEVKSGAVNTAGNSVEEKTIKIGFNFEESGSLAAYGTAE
D39 MKKKFALSFVALASVALLAACGEVKSGAVNTAGNSVEEKTIKIGFNFEESGSLAAYGTAE
D39V MKKKFALSFVALASVALLAACGEVKSGAVNTAGNSVEEKTIKIGFNFEESGSLAAYGTAE
Hungary19A-6 MKKKFALSFVALASVALLAACGEVKSGAVNTAGNSVKEKTIKIGFNFEESGSLAAYGTAE
EF3030 MKKKFALSFVALASVALLAACGEVKSGAVNTAGNSVEEKTIKIGFNFEESGSLAAYGTAE
************************************:***********************
TIGR4 QKGAQLAVDEINAAGGIDGKQIEVVDKDNKSETAEAASVTTNLVTQSKVSAVVGPATSGA
D39 QKGAQLAVDEINAAGGIDGKQIEVVDKDNKSETAEAASVTTNLVTQSKVSAVVGPATSGA
D39V QKGAQLAVDEINAAGGIDGKQIEVVDKDNKSETAEAASVTTNLVTQSKVSAVVGPATSGA
Hungary19A-6 QKGAQLAVDEINAAGGIDGKQIEVVDKDNKSETAEAASVTTNLVTQSKVSAVVGPATSGA
EF3030 QKGAQLAVDEINAAGGIDGKQIEVIDKDNKSETAEAASVTTNLVTQSKVSAVVGPATSGA
************************:***********************************
TIGR4 TAAAVANATKAGVPLISPSATQDGLTKGQDYLFIGTFQDSFQGKIISNYVSEKLNAKKVV
D39 TAAAVANATKAGVPLISPSATQDGLTKGQDYLFIGTFQDSFQGKIISNYVSEKLNAKKVV
D39V TAAAVANATKAGVPLISPSATQDGLTKGQDYLFIGTFQDSFQGKIISNYVSEKLNAKKVV
Hungary19A-6 TAAAVANATKAGVPLISPSATQDGLTKGQDYLFIGTFQDSFQGKIISNYVSEKLNAKKVV
EF3030 TAAAVANATKAGVPLISPSATQDGLTKGQDYLFIGTFQDSFQGKIISNYVSEKLNAKKVV
************************************************************
TIGR4 LYTDNASDYAKGIAKSFRESYKGEIVADETFVAGDTDFQAALTKMKGKDFDAIVVPGYYN
D39 LYTDNASDYAKGIAKSFRESYKGEIVADETFVAGDTDFQAALTKMKGKDFDAIVVPGYYN
D39V LYTDNASDYAKGIAKSFRESYKGEIVADETFVAGDTDFQAALTKMKGKDFDAIVVPGYYN
Hungary19A-6 LYTDNASDYAKGIAKSFRESYKGEIVADETFVAGDTDFQAALTKMKGKDFDAIVVPGYYN
EF3030 LYTDNASDYAKGIAKSFRESYKGEIVADETFVAGDTDFQAALTKMKGRDFDAIVVPGYYN
***********************************************:************
TIGR4 EAGKIVNQARGMGIDKPIVGGDGFNGEEFVQQATAEKASNIYFISGFSTTVEVSAKAKAF
D39 EAGKIVNQARGMGIDKPIVGGDGFNGEEFVQQATAEKASNIYFISGFSTTVEVSAKAKAF
D39V EAGKIVNQARGMGIDKPIVGGDGFNGEEFVQQATAEKASNIYFISGFSTTVEVSAKAKAF
Hungary19A-6 EAGKIVNQARGMGIDKPIVGGDGFNGEEFVQQATAEKASNIYFISGFSTTVEVSAKAKAF
EF3030 EAGKIVNQARGMGIDKPIVGGDGFNGEEFVQQATAEKASNIYFISGFSTTVEVSAKAKAF
************************************************************
TIGR4 LDAYRAKYNEEPSTFAALAYDSVHLVANAAKGAKNSGEIKNNLAKTKDFEGVTGQTSFDA
D39 LDAYRAKYNEEPSTFAALAYDSVHLVANAAKGAKNSGEIKNNLAKTKDFEGVTGQTSFDA
D39V LDAYRAKYNEEPSTFAALAYDSVHLVANAAKGAKNSGEIKNNLAKTKDFEGVTGQTSFDA
Hungary19A-6 LDAYRAKYNEEPSTFAALAYDSVHLVANAAKGAKNSGEIKDNLAKTKDFEGVTGQTSFDA
EF3030 LDAYRAKYNEEPSTFAALAYDSVHLVANAAKGAKNSGEIKNNLAKTKDFEGVTGQTSFDA
****************************************:*******************
TIGR4 DHNTVKTAYMMTMNNGKVEAAEVVKP
D39 DHNTVKTAYMMTMNNGKVEAAEVVKP
D39V DHNTVKTAYMMTMNNGKVEAAEVVKP
Hungary19A-6 DHNTVKTAYMMTMNNGKVEAAEVVKP
EF3030 DHNTVKTAYMMTMNNGKVEAAEVVKP
**************************