pan ID^?: PNEUPAN001757000
symbol^?: gyrB
synonym:
description^?: DNA topoisomerase (ATP-hydrolyzing) subunit B
- DNA topoisomerase (ATP-hydrolyzing) subunit B
- DNA gyrase subunit B
- DNA gyrase, B subunit
- DNA gyrase
- Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
strand^?: +
coordinates^?: 2201667..2203613
occurrence^?: in 100% of 43 strains

⊟Orthologs[edit | edit source]

TIGR4:

SP_RS03950 (gyrB)

D39:

SPD_RS03815 (gyrB)

D39V:

SPV_RS03810 (gyrB)

Hungary19A-6:

SPH_RS04390 (gyrB)

EF3030:

EF3030_RS03820 (gyrB)

670-6B:

SP670_RS07520 (gyrB)

6A-10:

HKM25_RS03810 (gyrB)

70585:

SP70585_RS04200 (gyrB)

A026:

T308_RS06685 (gyrB)

A66:

A66_RS03670 (gyrB)

AP200:

SPAP_RS03885 (gyrB)

ASP0581:

EL334_RS03990 (gyrB)

ATCC 49619:

EL263_RS04005 (gyrB)

ATCC 700669:

SPN23F_RS03745 (gyrB)

BM6001:

ODS73_RS04230 (gyrB)

BVJ1JL:

JN057_RS03910 (gyrB)

CGSP14:

SPCG_RS03935 (gyrB)

G54:

SPG_RS03715 (gyrB)

gamPNI0373:

HMPREF1038_RS04020 (gyrB)

HU-OH:

EL271_RS03730 (gyrB)

Hu15:

SPNHU15_RS04020 (gyrB)

Hu17:

SPNHU17_RS03960 (gyrB)

INV104:

INV104_RS03940 (gyrB)

INV200:

SPNINV200_RS03815 (gyrB)

JJA:

SPJ_RS03745 (gyrB)

MDRSPN001:

MDRSPN_RS06210 (gyrB)

NCTC7465:

AT689_RS09790 (gyrB)

NCTC7466:

DQM66_RS03815 (gyrB)

NU83127:

EL277_RS04050 (gyrB)

OXC141:

SPNOXC_RS03905 (gyrB)

P1031:

SPP_RS03975 (gyrB)

R6:

SPR_RS03600 (gyrB)

SP49:

BMJ42_RS04585 (gyrB)

SPN032672:

SPN032672_RS10205 (gyrB)

SPN034156:

SPN034156_RS09830 (gyrB)

SPN034183:

SPN034183_RS03920 (gyrB)

SPN994038:

SPN994038_RS03840 (gyrB)

SPN994039:

SPN994039_RS03840 (gyrB)

SPNA45:

SPNA45_RS06335 (gyrB)

ST556:

MYY_RS07130 (gyrB)

Taiwan19F-14:

SPT_RS06925 (gyrB)

TCH8431/19A:

HMPREF0837_RS08065 (gyrB)

Xen35:

CXP32_RS04020 (gyrB)

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.505)

TIGR4           MTEEIKNLQAQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA
D39             MTEEIKNLQAQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA
D39V            MTEEIKNLQAQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA
Hungary19A-6    MTEEIKNLQAQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA
EF3030          MTEEIKNLQAQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA
                ************************************************************

TIGR4           GFASHIQVFIEPDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG
D39             GFASHIQVFIEPDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG
D39V            GFASHIQVFIEPDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG
Hungary19A-6    GFASHIQVFIEPDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG
EF3030          GFASHIQVFIEPDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG
                ************************************************************

TIGR4           GLHGVGSSVVNALSTQLDVHVHKNGKIHYQEYRRGHVVADLEIVGDTDKTGTTVHFTPDP
D39             GLHGVGSSVVNALSTQLDVHVHKNGKIHYQEYRRGHVVADLEIVGDTDKTGTTVHFTPDP
D39V            GLHGVGSSVVNALSTQLDVHVHKNGKIHYQEYRRGHVVADLEIVGDTDKTGTTVHFTPDP
Hungary19A-6    GLHGVGSSVVNALSTQLDVHVHKNGKIHYQEYRRGHVVADLEVVGDTDRTGTTVHFTPDP
EF3030          GLHGVGSSVVNALSTQLDVHVHKNGKIHYQEYRRGHVVADLEVVGDTDRTGTTVHFTPDP
                ******************************************:*****:***********

TIGR4           KIFTETTIFDFDKLNKRIQELAFLNRGLQISITDKRQGLEQTKHYHYEGGIASYVEYINE
D39             KIFTETTIFDFDKLNKRIQELAFLNRGLQISITDKRQGLEQTKHYHYEGGIASYVEYINE
D39V            KIFTETTIFDFDKLNKRIQELAFLNRGLQISITDKRQGLEQTKHYHYEGGIASYVEYINE
Hungary19A-6    EIFTETTIFDFDKLNKRIQELAFLNRGLQISITDKRQGLEQTKHYHYEGGIASYVEYINE
EF3030          EIFTETTIFDFDKLNKRIQELAFLNRGLQISITDKRQGLEQTKHYHYEGGIASYVEYINE
                :***********************************************************

TIGR4           NKDVIFDTPIYTDGEMDDITVEVAMQYTTGYHENVMSFANNIHTHEGGTHEQGFRTALTR
D39             NKDVIFDTPIYTDGEMDDITVEVAMQYTTGYHENVMSFANNIHTHEGGTHEQGFRTALTR
D39V            NKDVIFDTPIYTDGEMDDITVEVAMQYTTGYHENVMSFANNIHTHEGGTHEQGFRTALTR
Hungary19A-6    NKDVIFDTPIYTDGEMDDITVEVAMQYTTGYHENVMSFANNIHTHEGGTHEQGFRTALTR
EF3030          NKDVIFDTPIYTDGEMDDITVEVAMQYTTGYHENVMSFANNIHTHEGGTHEQGFRTALTR
                ************************************************************

TIGR4           VINDYARKNKLLKDNEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR
D39             VINDYARKNKLLKDNEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR
D39V            VINDYARKNKLLKDNEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR
Hungary19A-6    VINDYARKNKLLKDNEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR
EF3030          VINDYARKNKLLKDNEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR
                ************************************************************

TIGR4           LFSEAFSDFLMENPQIAKRIVEKGILAAKARVAAKRAREVTRKKSGLEISNLPGKLADCS
D39             LFSEAFSDFLMENPQIAKRIVEKGILAAKARVAAKRAREVTRKKSGLEISNLPGKLADCS
D39V            LFSEAFSDFLMENPQIAKRIVEKGILAAKARVAAKRAREVTRKKSGLEISNLPGKLADCS
Hungary19A-6    LFSEAFSDFLMENPQIAKRIVEKGILAAKARVAAKRAREVTRKKSGLEISNLPGKLADCS
EF3030          LFSEAFSDFLMENPQIAKRIVEKGILAAKARVAAKRAREVTRKKSGLEISNLPGKLADCS
                ************************************************************

TIGR4           SNNPAETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF
D39             SNNPAETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF
D39V            SNNPAETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF
Hungary19A-6    SNNPAETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF
EF3030          SNNPAETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF
                ************************************************************

TIGR4           TAMGTGFGAEFDVSKARYQKLVLMTDADVDGAHIRTLLLTLIYRYMKPILEAGYVYIAQP
D39             TAMGTGFGAEFDVSKARYQKLVLMTDADVDGAHIRTLLLTLIYRYMKPILEAGYVYIAQP
D39V            TAMGTGFGAEFDVSKARYQKLVLMTDADVDGAHIRTLLLTLIYRYMKPILEAGYVYIAQP
Hungary19A-6    TAMGTGFGAEFDVSKARYQKLVLMTDADVDGAHIRTLLLTLIYRYMKPILEAGYVYIAQP
EF3030          TAMGTGFGAEFDVSKARYQKLVLMTDADVDGAHIRTLLLTLIYRYMKPILEAGYVYIAQP
                ************************************************************

TIGR4           PIYGVKVGSEIKEYIQPGADQEIKLQEALARYSEGRTKPTIQRYKGLGEMDDHQLWETTM
D39             PIYGVKVGSEIKEYIQPGADQEIKLQEALARYSEGRTKPTIQRYKGLGEMDDHQLWETTM
D39V            PIYGVKVGSEIKEYIQPGADQEIKLQEALARYSEGRTKPTIQRYKGLGEMDDHQLWETTM
Hungary19A-6    PIYGVKVGSEIKEYIQPGADQEIKLQEALARYSEGRTKPTIQRYKGLGEMDDHQLWETTM
EF3030          PIYGVKVGSEIKEYIQPGADQEIKLQEALARYSEGRTKPTIQRYKGLGEMDDHQLWETTM
                ************************************************************

TIGR4           DPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLDV
D39             DPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLDV
D39V            DPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLDV
Hungary19A-6    DPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLDV
EF3030          DPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLDV
                ************************************************

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]