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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001791000
- symbol?: glnP4
- synonym:
- description?: amino acid ABC transporter permease
- amino acid ABC transporter permease
- amino acid ABC transporter, permease protein
- Arginine transport system permease protein ArtQ
- glutamine ABC transporter permease
- putative amino acid ABC transporter permease protein
- ABC transporter membrane-spanning permease - glutamine transport
- ABC transporter, permease protein
- ABC-type amino acid transport system, permease component
- amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein
- amino acid ABC transporter permease/ATP-binding protein
- Glutamine ABC transporter permease GlnP4
- putative glutamine transporter
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2159999..2160579
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MNFSFLPKYLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIF
D39 MNFSFLPKYLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIF
D39V MNFSFLPKYLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIF
Hungary19A-6 MNFSFLPKYLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIF
EF3030 MNFSFLPKYLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIF
************************************************************
TIGR4 RGTPMMVQIMIAFALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRAGINA
D39 RGTPMMVQIMIAFALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSEIVRAGINA
D39V RGTPMMVQIMIAFALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSEIVRAGINA
Hungary19A-6 RGTPMMVQIMIAFALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRAGINA
EF3030 RGTPMMVQIMIAFALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRAGINA
**************************************************** *******
TIGR4 VPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWN
D39 VPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWN
D39V VPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWN
Hungary19A-6 VPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWN
EF3030 VPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWN
************************************************************
TIGR4 GATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK
D39 GATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK
D39V GATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK
Hungary19A-6 GATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK
EF3030 GATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK
***********************************************