PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001824000
• symbol^?: pbp3
• synonym:
• description^?: D-alanyl-D-alanine carboxypeptidase PBP3

  descriptions from strain specific annotations:

  • D-alanyl-D-alanine carboxypeptidase PBP3
  • D-alanyl-D-alanine carboxypeptidase
  • putative D-alanyl-D-alanine carboxypeptidase
  • penicillin-binding protein 3
  • D-alanyl-D-alanine carboxypeptidase DacA
  • D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 3
  • D-alanyl-D-alanine carboxypeptidase%2C penicillin-binding protein 3
  • penicillin-binding protein 3, D-alanyl-D-alanine carboxypeptidase
  • penicillin-binding protein 3/D-alanyl-D-alanine carboxypeptidase
  • serine-type D-Ala-D-Ala carboxypeptidase
  • pseudogene
• strand^?: -
• coordinates^?: 2285214..2286458
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS04300 (pbp3)
(2)
D39:
SPD_RS04110 (pbp3)
(2)
D39V:
SPV_RS04105 (pbp3)
(19A)
Hungary19A-6:
SPH_RS04720 (pbp3)
(19F)
EF3030:
EF3030_RS04125 (pbp3)
(6B)^?
670-6B:
SP670_RS07185 (pbp3)
(6A)
6A-10:
HKM25_RS04075 (pbp3)
(5)
70585:
SP70585_RS04500 (pbp3)
(19F)
A026:
T308_RS06365 (pbp3)
(3)
A66:
A66_RS03940 (pbp3)
(11A)
AP200:
SPAP_RS04195 (pbp3)
(12F)
ASP0581:
EL334_RS04295 (pbp3)
(19F)
ATCC 49619:
EL263_RS04305 (pbp3)
(23F)
ATCC 700669:
SPN23F_RS04055 (pbp3)
(19F)
BM6001:
ODS73_RS04525 (pbp3)
(1)
BVJ1JL:
JN057_RS04190 (pbp3)
(14)
CGSP14:
SPCG_RS04250 (pbp3)
(19F)
G54:
SPG_RS04025 (pbp3)
(1)
gamPNI0373:
HMPREF1038_RS04360 (pbp3)
(3)
HU-OH:
EL271_RS04030 (pbp3)
(19A)
Hu15:
SPNHU15_RS04295 (pbp3)
(19A)
Hu17:
SPNHU17_RS04235 (pbp3)
(1)
INV104:
INV104_RS04225 (pbp3)
(14)
INV200:
SPNINV200_RS04135 (pbp3)
(14)
JJA:
SPJ_RS04055 (pbp3)
(19F)
MDRSPN001:
MDRSPN_RS05910 (pbp3)
(1)
NCTC7465:
AT689_RS09460 (pbp3)
(2)
NCTC7466:
DQM66_RS04110 (pbp3)
(4)
NU83127:
EL277_RS04375 (pbp3)
(3)
OXC141:
SPNOXC_RS04220 (pbp3)
(1)
P1031:
SPP_RS04325 (pbp3)
(2)
R6:
SPR_RS03890 (pbp3)
(19A)
SP49:
BMJ42_RS04945 (pbp3)
(1)
SPN032672:
SPN032672_RS10490 (pbp3)
(3)
SPN034156:
SPN034156_RS10145 (pbp3)
(3)
SPN034183:
SPN034183_RS04230 (pbp3)
(3)
SPN994038:
SPN994038_RS04155 (pbp3)
(3)
SPN994039:
SPN994039_RS04155 (pbp3)
(3)
SPNA45:
SPNA45_RS06655 (pbp3)
(19F)
ST556:
MYY_RS06800 (pbp3)
(19F)
Taiwan19F-14:
SPT_RS06600 (pbp3)
(19A)
TCH8431/19A:
HMPREF0837_RS07750 (pbp3)
(4)
Xen35:
CXP32_RS04330 (pbp3)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL
  D39             MKKIFLTLLTVSLLGGVSTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL
  D39V            MKKIFLTLLTVSLLGGVSTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL
  Hungary19A-6    MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL
                  ****************.*******************************************
  
  TIGR4           ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA
  D39             ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA
  D39V            ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA
  Hungary19A-6    ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA
                  ************************************************************
  
  TIGR4           NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE
  D39             NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE
  D39V            NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE
  Hungary19A-6    NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE
                  ************************************************************
  
  TIGR4           NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT
  D39             NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT
  D39V            NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT
  Hungary19A-6    NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT
                  ************************************************************
  
  TIGR4           GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ
  D39             GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ
  D39V            GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ
  Hungary19A-6    GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ
                  ************************************************************
  
  TIGR4           QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV
  D39             QGDAYQDSKAPVQDGKEDTVIAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV
  D39V            QGDAYQDSKAPVQDGKEDTVIAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV
  Hungary19A-6    QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIEQIGNQSSQSVQFTPDSKAIPAPLEAGTV
                  ******************** ***********::**************************
  
  TIGR4           VGHLTYEDKDLIGQGYITTERPSFEMVADKKIEKAFFLKVWWNQFVRFVNEKL
  D39             VGHLTYEDKDLIGQGYITTERPSFEMVADKKIEKAFFLKVWWNQFVRFVNEKL
  D39V            VGHLTYEDKDLIGQGYITTERPSFEMVADKKIEKAFFLKVWWNQFVRFVNEKL
  Hungary19A-6    VGHLTYEDKDLIGQGYITTERPSFEMVADKKIEKAFFLKVWWNQFVRFVNEKL
                  *****************************************************