PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001901000
• symbol^?: nspC
• synonym:
• description^?: carboxynorspermidine decarboxylase

  descriptions from strain specific annotations:

  • carboxynorspermidine decarboxylase
  • putative carboxynorspermidine decarboxylase
  • Carboxynorspermidine/carboxyspermidine
  • LysA-like decarboxylase, diaminopimelate decarboxylase putative
  • Carboxynorspermidine/carboxyspermidine decarboxylase
  • Diaminopimelate decarboxylase
  • LysA-like decarboxylase%2C diaminopimelate decarboxylase putative
• strand^?: +
• coordinates^?: 2375777..2376904
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS04550 (nspC)
(2)
D39:
SPD_RS04360 (nspC)
(2)
D39V:
SPV_RS04350 (nspC)
(19A)
Hungary19A-6:
SPH_RS04980 (nspC)
(19F)
EF3030:
EF3030_RS04410 (nspC)
(6B)^?
670-6B:
SP670_RS06940 (nspC)
(6A)
6A-10:
HKM25_RS04340 (nspC)
(5)
70585:
SP70585_RS04765 (nspC)
(19F)
A026:
T308_RS06085 (nspC)
(3)
A66:
A66_RS04160 (nspC)
(11A)
AP200:
SPAP_RS04725 (nspC)
(12F)
ASP0581:
EL334_RS04590 (nspC)
(19F)
ATCC 49619:
EL263_RS04570 (nspC)
(23F)
ATCC 700669:
SPN23F_RS04300 (nspC)
(19F)
BM6001:
ODS73_RS04770 (nspC)
(1)
BVJ1JL:
JN057_RS04410 (nspC)
(14)
CGSP14:
SPCG_RS04655 (nspC)
(19F)
G54:
SPG_RS04270 (nspC)
(1)
gamPNI0373:
HMPREF1038_RS04625 (nspC)
(3)
HU-OH:
EL271_RS04300 (nspC)
(19A)
Hu15:
SPNHU15_RS04525 (nspC)
(19A)
Hu17:
SPNHU17_RS04460 (nspC)
(1)
INV104:
INV104_RS04620 (nspC)
(14)
INV200:
SPNINV200_RS04535 (nspC)
(14)
JJA:
SPJ_RS04305 (nspC)
(19F)
MDRSPN001:
MDRSPN_RS05640 (nspC)
(1)
NCTC7465:
AT689_RS09220 (nspC)
(2)
NCTC7466:
DQM66_RS04360 (nspC)
(4)
NU83127:
EL277_RS04640 (nspC)
(3)
OXC141:
SPNOXC_RS04475 (nspC)
(1)
P1031:
SPP_RS04570 (nspC)
(2)
R6:
SPR_RS04120 (nspC)
(19A)
SP49:
BMJ42_RS05180 (nspC)
(1)
SPN032672:
SPN032672_RS10880 (nspC)
(3)
SPN034156:
SPN034156_RS10395 (nspC)
(3)
SPN034183:
SPN034183_RS04490 (nspC)
(3)
SPN994038:
SPN994038_RS04400 (nspC)
(3)
SPN994039:
SPN994039_RS04405 (nspC)
(3)
SPNA45:
SPNA45_RS06905 (nspC)
(19F)
ST556:
MYY_RS06550 (nspC)
(19F)
Taiwan19F-14:
SPT_RS06345 (nspC)
(19A)
TCH8431/19A:
HMPREF0837_RS07500 (nspC)
(4)
Xen35:
CXP32_RS04590 (nspC)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKLEQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTT
  D39             MKLEQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTT
  D39V            MKLEQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTT
  Hungary19A-6    MKLEQVPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTT
  EF3030          MKLEQVPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTT
                  *******************************.****************************
  
  TIGR4           ASGLYEAKLAREEFPGEVHVFAPAFKDADLEELLEIMDHIVFNSERQLRKHGPRCREAGV
  D39             ASGLYEAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGARCREAGV
  D39V            ASGLYEAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGARCREAGV
  Hungary19A-6    ASGLYEAKLAREEFPGEVHVFAPAFKDADLEELLGITDHIVFNSERQLRKHGARCREAGV
  EF3030          ASGLYEAKLAREEFPGEVHVFAPAFKDADLEELLEIMDHIVFNSERQLRKHGPRCREAGV
                  *************************** *:**** * ***************.*******
  
  TIGR4           SVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADDLQ
  D39             SVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADDLQ
  D39V            SVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADDLQ
  Hungary19A-6    SVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADDLQ
  EF3030          SVGLRLNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADDLQ
                  ************************************************************
  
  TIGR4           TTLKAVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEA
  D39             TTLKAVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEA
  D39V            TTLKAVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEA
  Hungary19A-6    TTLKAVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEA
  EF3030          TTLKAVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEA
                  ************************************************************
  
  TIGR4           IALNAGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRL
  D39             IALNAGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRL
  D39V            IALNAGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRL
  Hungary19A-6    IALNAGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRL
  EF3030          IALNAGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRL
                  **************************************************:*********
  
  TIGR4           SSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCS
  D39             SSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCS
  D39V            SSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCS
  Hungary19A-6    SSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCS
  EF3030          SSNTCLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCS
                  ************************************************************
  
  TIGR4           LLKAFGYQDFKGRLS
  D39             LLKAFGYQDFKGRLS
  D39V            LLKAFGYQDFKGRLS
  Hungary19A-6    LLKAFGYQDFKGRLS
  EF3030          LLKAFGYQDFKGRLS
                  ***************