PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001902000
• symbol^?: aguA
• synonym:
• description^?: Agmatine deiminase

  descriptions from strain specific annotations:

  • Agmatine deiminase
  • Porphyromonas-type peptidyl-arginine deiminase
  • conserved hypothetical protein
  • putative agmatine deiminase
  • Peptidylarginine deiminase-like enzyme
• strand^?: +
• coordinates^?: 2376901..2377987
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS04555 (aguA)
(2)
D39:
SPD_RS04365 (aguA)
(2)
D39V:
SPV_RS04355 (aguA)
(19A)
Hungary19A-6:
SPH_RS04985 (aguA)
(19F)
EF3030:
EF3030_RS04415 (aguA)
(6B)^?
670-6B:
SP670_RS06935 (aguA)
(6A)
6A-10:
HKM25_RS04345 (aguA)
(5)
70585:
SP70585_RS04770 (aguA)
(19F)
A026:
T308_RS06080 (aguA)
(3)
A66:
A66_RS04165 (aguA)
(11A)
AP200:
SPAP_RS04730 (aguA)
(12F)
ASP0581:
EL334_RS04595 (aguA)
(19F)
ATCC 49619:
EL263_RS04575 (aguA)
(23F)
ATCC 700669:
SPN23F_RS04305 (aguA)
(19F)
BM6001:
ODS73_RS04775 (aguA)
(1)
BVJ1JL:
JN057_RS04415 (aguA)
(14)
CGSP14:
SPCG_RS04660 (aguA)
(19F)
G54:
SPG_RS04275 (aguA)
(1)
gamPNI0373:
HMPREF1038_RS04630 (aguA)
(3)
HU-OH:
EL271_RS04305 (aguA)
(19A)
Hu15:
SPNHU15_RS04530 (aguA)
(19A)
Hu17:
SPNHU17_RS04465 (aguA)
(1)
INV104:
INV104_RS04625 (aguA)
(14)
INV200:
SPNINV200_RS04540 (aguA)
(14)
JJA:
SPJ_RS04310 (aguA)
(19F)
MDRSPN001:
MDRSPN_RS05635 (aguA)
(1)
NCTC7465:
AT689_RS09215 (aguA)
(2)
NCTC7466:
DQM66_RS04365 (aguA)
(4)
NU83127:
EL277_RS04645 (aguA)
(3)
OXC141:
SPNOXC_RS04480 (aguA)
(1)
P1031:
SPP_RS04575 (aguA)
(2)
R6:
SPR_RS04125 (aguA)
(19A)
SP49:
BMJ42_RS05185 (aguA)
(1)
SPN032672:
SPN032672_RS10885 (aguA)
(3)
SPN034156:
SPN034156_RS10400 (aguA)
(3)
SPN034183:
SPN034183_RS04495 (aguA)
(3)
SPN994038:
SPN994038_RS04405 (aguA)
(3)
SPN994039:
SPN994039_RS04410 (aguA)
(3)
SPNA45:
SPNA45_RS06910 (aguA)
(19F)
ST556:
MYY_RS06545 (aguA)
(19F)
Taiwan19F-14:
SPT_RS06340 (aguA)
(19A)
TCH8431/19A:
HMPREF0837_RS07495 (aguA)
(4)
Xen35:
CXP32_RS04595 (aguA)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MMDSPKKLGYHMPAEYEPHHGTLMIWPTRPGSWPFQGKAAKRAFTQIIETIAEGERVYLL
  D39             MMDSPKKLGYHMPAEYEPHHGTLMIWPIRPGSWPFQGKAAKRAFTQIIETIAEGERVYLL
  D39V            MMDSPKKLGYHMPAEYEPHHGTLMIWPIRPGSWPFQGKAAKRAFTQIIETIAEGERVYLL
  Hungary19A-6    MMDSPKKLGYHMPAEYEPHHGTLMIWPTRPGSWPFQGKDAKRAFTQIIETIAEGERVYLL
  EF3030          MMDSPKKLGYHMPAEYEPHHGTLMIWPTRPGSWPFQGKAAKRAFTQIIETIAEGERVYLL
                  *************************** ********** *********************
  
  TIGR4           VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKGKKLAVDWAFNAWGGTYDG
  D39             VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKGKKLAVDWAFNAWGGTYDG
  D39V            VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKGKKLAVDWAFNAWGGTYDG
  Hungary19A-6    VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKGKKLAVDWAFNAWGGTYDG
  EF3030          VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKGKKLAVDWAFNAWGGTYDG
                  ************************************************************
  
  TIGR4           LYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL
  D39             LYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL
  D39V            LYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL
  Hungary19A-6    LYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL
  EF3030          LYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL
                  ************************************************************
  
  TIGR4           TKEEIENTLLESLGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYA
  D39             TKEEIENTLLESLGAEKVIWLPYGIYQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYA
  D39V            TKEEIENTLLESLGAEKVIWLPYGIYQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYA
  Hungary19A-6    TKEEIENTLLESLGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAEVVLAWTDDENDPQYA
  EF3030          TKEEIENTLLESLGAEKVIWLPYGIYQDETNEHVDNVAAFVGPAELVLAWTDDENDPQYA
                  *************************************.*******:**************
  
  TIGR4           MSKADLELLEQETDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAAS
  D39             MSKADLELLEQETDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEERYAGERLAAS
  D39V            MSKADLELLEQETDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEERYAGERLAAS
  Hungary19A-6    MSKADLELLEQETDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEERYAGERLAAS
  EF3030          MSKADLELLEQETDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEKRYAGERLAAS
                  *************************************************:**********
  
  TIGR4           YVNFYIANKAVLVPQFEDVNDQVALDILSKCFPDRKVVGIPARDILLGGGNIHCITQQIP
  D39             YVNFYIANKAVLVPQFEDVNDQVALDILSKCFPDRKVVGIPARDILLGGGNIHCITQQIP
  D39V            YVNFYIANKAVLVPQFEDVNDQVALDILSKCFPDRKVVGIPARDILLGGGNIHCITQQIP
  Hungary19A-6    YVNFYIANKAVLVPQFEDVNDQVALDILSKCFPDRKVVGIPARDILLGGGNIHCITQQIP
  EF3030          YVNFYIANKAVLVPQFEDVNDQVALDILSKCFPDRKVVGIPARDILLGGGNIHCITQQIP
                  ************************************************************
  
  TIGR4           E
  D39             E
  D39V            E
  Hungary19A-6    E
  EF3030          E
                  *