PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001931000
• symbol^?: trmFO
• synonym:
• description^?: methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO

  descriptions from strain specific annotations:

  • methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
  • tRNA:M(5)U-54 methyltransferase
  • protein Gid homolog
  • methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO
  • tRNA (uracil-5-)-methyltransferase Gid
  • tRNA (uracil-5-)-methyltransferase
  • tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid
  • FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO
  • Gid protein
  • Glucose inhibited division protein
  • glucose-inhibited division protein A
  • m(5)U-54 methyltransferase
  • N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase
  • NAD(FAD)-utilizing enzyme possibly involved in translation
  • tRNA:m(5)U-54 MTase gid
• strand^?: +
• coordinates^?: 2402308..2403642
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS04665 (trmFO)
(2)
D39:
SPD_RS04470 (trmFO)
(2)
D39V:
SPV_RS04460 (trmFO)
(19A)
Hungary19A-6:
SPH_RS05070 (trmFO)
(19F)
EF3030:
EF3030_RS04525 (trmFO)
(6B)^?
670-6B:
SP670_RS06825 (trmFO)
(6A)
6A-10:
HKM25_RS04460 (trmFO)
(5)
70585:
SP70585_RS04880 (trmFO)
(19F)
A026:
T308_RS05995 (trmFO)
(3)
A66:
A66_RS04275 (trmFO)
(11A)
AP200:
SPAP_RS04845 (trmFO)
(12F)
ASP0581:
EL334_RS04700 (trmFO)
(19F)
ATCC 49619:
EL263_RS04660 (trmFO)
(23F)
ATCC 700669:
SPN23F_RS04420 (trmFO)
(19F)
BM6001:
ODS73_RS04860 (trmFO)
(1)
BVJ1JL:
JN057_RS04520 (trmFO)
(14)
CGSP14:
SPCG_RS04775 (trmFO)
(19F)
G54:
SPG_RS04390 (trmFO)
(1)
gamPNI0373:
HMPREF1038_RS04740 (trmFO)
(3)
HU-OH:
EL271_RS04390 (trmFO)
(19A)
Hu15:
SPNHU15_RS04615 (trmFO)
(19A)
Hu17:
SPNHU17_RS04550 (trmFO)
(1)
INV104:
INV104_RS04735 (trmFO)
(14)
INV200:
SPNINV200_RS04625 (trmFO)
(14)
JJA:
SPJ_RS04420 (trmFO)
(19F)
MDRSPN001:
MDRSPN_RS05550 (trmFO)
(1)
NCTC7465:
AT689_RS09105 (trmFO)
(2)
NCTC7466:
DQM66_RS04470 (trmFO)
(4)
NU83127:
EL277_RS04750 (trmFO)
(3)
OXC141:
SPNOXC_RS04590 (trmFO)
(1)
P1031:
SPP_RS04685 (trmFO)
(2)
R6:
SPR_RS04230 (trmFO)
(19A)
SP49:
BMJ42_RS05270 (trmFO)
(1)
SPN032672:
SPN032672_RS10995 (trmFO)
(3)
SPN034156:
SPN034156_RS10485 (trmFO)
(3)
SPN034183:
SPN034183_RS04605 (trmFO)
(3)
SPN994038:
SPN994038_RS04515 (trmFO)
(3)
SPN994039:
SPN994039_RS04520 (trmFO)
(3)
SPNA45:
SPNA45_RS07030 (trmFO)
(19F)
ST556:
MYY_RS06460 (trmFO)
(19F)
Taiwan19F-14:
SPT_RS06255 (trmFO)
(19A)
TCH8431/19A:
HMPREF0837_RS07410 (trmFO)
(4)
Xen35:
CXP32_RS04700 (trmFO)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGD
  D39             MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGD
  D39V            MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGD
  Hungary19A-6    MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGD
  EF3030          MSQSYINVIGAGLAGSEAAYQIAERGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSLRGD
                  ************************************************************
  
  TIGR4           ALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVR
  D39             ALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVR
  D39V            ALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVR
  Hungary19A-6    ALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVR
  EF3030          ALTNAVGLLKEEMRRLGSVILESAEATRVPAGGALAVDRDGFSQMVTEKVANHPLIEVVR
                  ************************************************************
  
  TIGR4           DEITELPTDVITVIATGPLTSDALAEKIHALNDGAGFYFYDAAAPIIDVNTIDMSKVYLK
  D39             DEITELPTDVITVIATGPLTSDALAEKIHALNDGDGFYFYDAAAPIIDVNTIDMSKVYLK
  D39V            DEITELPTDVITVIATGPLTSDALAEKIHALNDGDGFYFYDAAAPIIDVNTIDMSKVYLK
  Hungary19A-6    DEITELPTDVITVIATGPLTSDALAEKIHALNDGDGFYFYDAAAPIIDVNTIDMSKVYLK
  EF3030          DEITELPTDVITVIATGPLTSDALAEKIHALNDGAGFYFYDAAAPIIDVNTIDMSKVYLK
                  ********************************** *************************
  
  TIGR4           SRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLSSFEKEKYFEGCMPIEVMAKRGIKT
  D39             SRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKT
  D39V            SRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKT
  Hungary19A-6    SRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKT
  EF3030          SRYDKGEAAYLNAPMTKQEFMDFHEALVNAEEAPLSSFEKEKYFEGCMPIEVMAKRGIKT
                  ***********************************.************************
  
  TIGR4           MLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKR
  D39             MLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKR
  D39V            MLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKR
  Hungary19A-6    MLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKR
  EF3030          MLYGPMKPVGLEYPDDYTGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKR
                  ************************************************************
  
  TIGR4           VFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAA
  D39             VFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAA
  D39V            VFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAA
  Hungary19A-6    VFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAA
  EF3030          VFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTYRSKKQPNLFFAGQMTGVEGYVESAA
                  ************************************************************
  
  TIGR4           SGLVAGINAARLFKEESEAIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERI
  D39             SGLVAGINAARLFKEESEVIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERI
  D39V            SGLVAGINAARLFKEESEVIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERI
  Hungary19A-6    SGLVAGINAARLFKEESEVIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERI
  EF3030          SGLVAGINAARLFKEESEAIFPETTAIGSLAHYITHADSKHFQPMNVNFGIIKELEGERI
                  ******************.*****************************************
  
  TIGR4           RDKKARYEKIAERALADLEEFLTV
  D39             RDKKARYEKIAERALADLEEFLTV
  D39V            RDKKARYEKIAERALADLEEFLTV
  Hungary19A-6    RDKKARYEKIAERALADLEEFLTV
  EF3030          RDKKARYEKIAERALADLEEFLTV
                  ************************