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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001943000
- symbol?: rsmI
- synonym:
- description?: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
- 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
- tetrapyrrole (corrin/porphyrin) methylase family protein
- Conserved hypothetical protein
- ribosomal RNA small subunit methyltransferase I
- tetrapyrrole methylase family protein
- tetrapyrrole methylase
- 16S rRNA methyltransferase
- conserved hypothetical protein TIGR00096
- Predicted methyltransferase
- putative methyltransferase
- rRNA small subunit methyltransferase I
- S-adenosylmethionine-dependent methyltransferase, YraL family
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2328669..2329538
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS10480 (rsmI)
SPN034183:
SPN034183_RS04575 (rsmI)
SPN994038:
SPN994038_RS04485 (rsmI)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDI
D39 MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDI
D39V MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDI
Hungary19A-6 MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDI
EF3030 MQIQKSFKGQSPYGKLYLVATPIGNLDDMTFRAIQTLKEVDWIAAEDTRNTGLLLKHFDI
************************************************************
TIGR4 STKQISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVT
D39 STKQISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVT
D39V STKQISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVT
Hungary19A-6 STKQISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVT
EF3030 STKQISFHEHNAKEKIPDLIGFLKAGQSIAQVSDAGLPSISDPGHDLVKAAIEEEIAVVT
************************************************************
TIGR4 VPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFGLKKDYPETQIFYESPHRVADT
D39 VPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFGLKKDYPETQIFYESPHRVADT
D39V VPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFGLKKDYPETQIFYESPHRVADT
Hungary19A-6 VPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFDSKKDYPETQIFYESPHRVADT
EF3030 VPGASAGISALIASGLAPQPHIFYGFLPRKSGQQKQFFGLKKDYPETQIFYESPHRVADT
**************************************. ********************
TIGR4 LENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESIAETPLKGECLLIVEGASQGVEE
D39 LENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESIAETPLKGECLLIVEGASQGVEE
D39V LENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESIAETPLKGECLLIVEGASQGVEE
Hungary19A-6 LENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESISETSLKGECLLIVEGASKGVEE
EF3030 LENMLEVYGDRSVVLVRELTKIYEEYQRGTISELLESIAETPLKGECLLIVEGASQGVEE
**************************************:**.*************:****
TIGR4 KDEEDLFVEIQTRIQQGVKKNQAIKEVAKIYQWNKSQLYAAYHDWEEKQ---
D39 KDEEDLFVEIQTRIQQGVKKNQAIKEVAKIYQWNKSQLYAAYHDWEEKQ---
D39V KDEEDLFVEIQTRIQQGVKKNQAIKEVAKIYQWNKSQLYAAYHDWEEKQ---
Hungary19A-6 KDEEDLFLEIQARIQQGMKKNQAIKEVAKIYQWNKSQLYAAYHDWEENQEND
EF3030 KDEEDLFVEIQTRIQQGVKKNQAIKEVAKIYQWNKSQLYAAYHDWEEKQ---
*******:***:*****:*****************************:*