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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001954000
- symbol?: —
- synonym:
- description?: ABC transporter permease
- ABC transporter permease
- membrane protein
- putative membrane protein
- membrane protein, putative
- ABC-type transport system involved in multi-copper enzyme maturation, permease component
- ABC-2 transporter family protein
- ABC-type transport system involved in multi-copper enzyme maturation%2C permease component
- conserved hypothetical protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2422285..2423866
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKDVSLFLLKKVFKSRLNWIVLALFVSVLGVTFYLNSQTANSHSLESRLESRIAANERAI
D39 MKDVSLFLLKKVFKSRLNWIILLLFASVLGVTFYLNSQTANSVSLERELETRLVDRERVI
D39V MKDVSLFLLKKVFKSRLNWIILLLFASVLGVTFYLNSQTANSVSLERELETRLVDRERVI
Hungary19A-6 MKDVSLFLLKKVFKSRLNWIILLLFASVLGVTFYLNSQTANSHSLESRLESRIAANERAI
EF3030 MKDVSLFLLKKVFKSRLNWIVLALFVSVLGVTFYLNSQTANSHSLESRLESRIAANERAI
********************:* **.**************** *** .**:*:. .**.*
TIGR4 NENEEKLSQMSDTSSEEYQFAKNNLDVQKNLLTRKTEILTLLKEGRWKEAYYLQWQDEEK
D39 NENEEKLSQMSDTSSEEYQFAKNNLDVQKNLLTRKTEILTLLKEGRWKEAYYLQWQDEEK
D39V NENEEKLSQMSDTSSEEYQFAKNNLDVQKNLLTRKTEILTLLKEGRWKEAYYLQWQDEEK
Hungary19A-6 NENEEKLSQMSDTSSEEYQFAKNNLDVQKNLLTRKTEILTLLKEGRWKEAYYLQWQDEEK
EF3030 NENEEKLSQMSDTSSEEYQFAKNNLDVQKNLLTRKTEILTLLKEGRWKEAYYLQWQDEEK
************************************************************
TIGR4 NYEFVSNDPTASPGLKMGVDRERKIYQALYPLNIKAHTLEFPTHGIDQIVWILEVIIPSL
D39 NYEFVSNDPTASSGLKMGVDRERKIYQALYPLNIKAHTLEFPTHGIDQIVWILEVIIPSL
D39V NYEFVSNDPTASSGLKMGVDRERKIYQALYPLNIKAHTLEFPTHGIDQIVWILEVIIPSL
Hungary19A-6 NYEFVSNDPTASSGLKMGVDRERKIYQALYPLNIKAHTLEFPTHGIDQIVWILEVIIPSL
EF3030 NYEFVSNDPTASPGLKMGVDRERKIYQALYPLNIKAHTLEFPTHGIDQIVWILEVIIPSL
************.***********************************************
TIGR4 FVVAIIFMLTQLFAERYQNHLDTAHLYPVSKVTFAISSLGVGVGYVTVLFIGICGFSFLV
D39 FVVAIIFMLTQLFAERYQNHLDTAHLYPVSKVTFAMSSLGVGVGYVTVLFIGICGFSFLV
D39V FVVAIIFMLTQLFAERYQNHLDTAHLYPVSKVTFAMSSLGVGVGYVTVLFIGICGFSFLV
Hungary19A-6 FVVAIIFMLTQLFAERYQNHLDTAHLYPVSKVTFAISSLGVGVGYVTVLFIGICGFSFLV
EF3030 FVVAIIFMLTQLFAERYQNHLDTAHLYPVSKVTFAISSLGVGVGYVTVLFIGICGFSFLV
***********************************:************************
TIGR4 GSLISGFGQLDYPYPIYSLVNQEVTIGKIQDVLFPGLLLAFLAFIVIVEVVYLIAYFFKQ
D39 GSLISGFGQLDYPYPIYSLVNQEVTIGKMQDVLFPSLLLAFLAFIVIVEVVYLIAYFFKQ
D39V GSLISGFGQLDYPYPIYSLVNQEVTIGKMQDVLFPSLLLAFLAFIVIVEVVYLIAYFFKQ
Hungary19A-6 GSLISGFGQLDYPYPIYSLVNQEVTIGKIQDVLFPGLLLAFLAFIVIVEVVYLIAYFFKQ
EF3030 GSLISGFGQLDYPYPIYSLVNQEVTIGKIQDVLFPGLLLAFLAFIVIVEVVYLIAYFFKQ
****************************:******.************************
TIGR4 KMPVLFLSLIGIVGLLFGIQTIQPLQRIAHLIPFTYLRSVEILSGRLPKQIDNVDLNWSM
D39 KMPVLFLSLIGIVGLLFGIQTIQPLQRIAHLIPFTYLRSVEILSGRLSKQIDNVDLNWSM
D39V KMPVLFLSLIGIVGLLFGIQTIQPLQRIAHLIPFTYLRSVEILSGRLSKQIDNVDLNWSM
Hungary19A-6 KMPVLFLSLIGIVGLLFGIQTIQPLQRIAHLIPFTYLRSVEILSGRLPKQIDNVNLNWSM
EF3030 KMPVLFLSLIGIVGLLFGIQTIQPLQRIAHLIPFTYLRSVEILSGRLPKQIDNVDLNWSM
***********************************************.******:*****
TIGR4 GMVLLPCLIIFLLLGILFIERWGSSQKKEFFNRF
D39 GMVLLPCLIILLLVGILFIERWGSSRKKEVFK-V
D39V GMVLLPCLIILLLVGILFIERWGSSRKKEVFK-V
Hungary19A-6 GMVLLPCLIILLLVGILFIESWGSSRKKEVFK-V
EF3030 GMVLLPCLIIFLLLGILFIERWGSSQKKEFFNRF
**********:**:****** ****:***.*: .