PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002003000
• symbol^?: sdbB
• synonym:
• description^?: thiol-disulfide oxidoreductase-associated lipoprotein SdbB

  descriptions from strain specific annotations:

  • thiol-disulfide oxidoreductase-associated lipoprotein SdbB
  • thioredoxin family protein
  • putative redoxin family protein
  • thioredoxin
  • Thiol-disulfide oxidoreductase ResA
  • TlpA family protein disulfide reductase
  • Conserved hypothetical protein
  • redoxin family protein
  • SCO1/SenC family protein
  • Thiol:disulfide oxidoreductase
  • Thiol:disulfide oxidoreductase related to ResA
  • Thiol-disulfide isomerase and thioredoxin
• strand^?: +
• coordinates^?: 2468288..2471563
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS04960 (sdbB)
(2)
D39:
SPD_RS04765 (sdbB)
(2)
D39V:
SPV_RS04755 (sdbB)
(19A)
Hungary19A-6:
SPH_RS05335 (sdbB)
(19F)
EF3030:
EF3030_RS04820 (sdbB)
(6B)^?
670-6B:
SP670_RS06530 (sdbB)
(6A)
6A-10:
HKM25_RS04740 (sdbB)
(5)
70585:
SP70585_RS05180 (sdbB)
(19F)
A026:
T308_RS05690 (sdbB)
(3)
A66:
A66_RS05300 (sdbB)
(11A)
AP200:
SPAP_RS05125 (sdbB)
(12F)
ASP0581:
EL334_RS04995 (sdbB)
(19F)
ATCC 49619:
EL263_RS04955 (sdbB)
(23F)
ATCC 700669:
SPN23F_RS04710 (sdbB)
(19F)
BM6001:
ODS73_RS05140 (sdbB)
(1)
BVJ1JL:
JN057_RS04795 (sdbB)
(14)
CGSP14:
SPCG_RS05065 (sdbB)
(19F)
G54:
SPG_RS04655 (sdbB)
(1)
gamPNI0373:
HMPREF1038_RS05030 (sdbB)
(3)
HU-OH:
EL271_RS04685 (sdbB)
(19A)
Hu15:
SPNHU15_RS04875 (sdbB)
(19A)
Hu17:
SPNHU17_RS04800 (sdbB)
(1)
INV104:
INV104_RS05020 (sdbB)
(14)
INV200:
SPNINV200_RS04915 (sdbB)
(14)
JJA:
SPJ_RS04705 (sdbB)
(19F)
MDRSPN001:
MDRSPN_RS05255 (sdbB)
(1)
NCTC7465:
AT689_RS08820 (sdbB)
(2)
NCTC7466:
DQM66_RS04765 (sdbB)
(4)
NU83127:
EL277_RS05035 (sdbB)
(3)
OXC141:
SPNOXC_RS04875 (sdbB)
(1)
P1031:
SPP_RS04975 (sdbB)
(2)
R6:
SPR_RS04520 (sdbB)
(19A)
SP49:
BMJ42_RS05545 (sdbB)
(1)
SPN032672:
SPN032672_RS11290 (sdbB)
(3)
SPN034156:
SPN034156_RS10770 (sdbB)
(3)
SPN034183:
SPN034183_RS04895 (sdbB)
(3)
SPN994038:
SPN994038_RS04800 (sdbB)
(3)
SPN994039:
SPN994039_RS04805 (sdbB)
(3)
SPNA45:
SPNA45_RS07315 (sdbB)
(19F)
ST556:
MYY_RS06165 (sdbB)
(19F)
Taiwan19F-14:
SPT_RS05955 (sdbB)
(19A)
TCH8431/19A:
HMPREF0837_RS07110 (sdbB)
(4)
Xen35:
CXP32_RS04995 (sdbB)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQIAVGKDAPDFTLQSMDGK
  D39             MKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQISVGKDVPDFTLQSMDGK
  D39V            MKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQISVGKDVPDFTLQSMDGK
  Hungary19A-6    MKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQISVGKDVPDFTLQSMDGK
  EF3030          MKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQIAVGKDAPDFTLQSMDGK
                  *******************************************:****.***********
  
  TIGR4           EVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQ
  D39             EVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQ
  D39V            EVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQ
  Hungary19A-6    EVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQ
  EF3030          EVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQ
                  ************************************************************
  
  TIGR4           FPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDSQGKIGKIQFGAISNADAEAA
  D39             FPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDSQGKIGKIQFGAISNADAEAA
  D39V            FPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDSQGKIGKIQFGAISNADAEAA
  Hungary19A-6    FPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDSQGKIGKIQFGAISNADAEAA
  EF3030          FPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDSQGKIGKIQFGAISNADAEAA
                  ************************************************************
  
  TIGR4           FKEMN
  D39             FKEMN
  D39V            FKEMN
  Hungary19A-6    FKEMN
  EF3030          FKEMN
                  *****