PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002291000
• symbol^?: rexB
• synonym:
• description^?: ATP-dependent nuclease subunit B

  descriptions from strain specific annotations:

  • ATP-dependent nuclease subunit B
  • putative ATP-dependent exonuclease subunit B
  • exonuclease RexB
  • ATP-dependent helicase/deoxyribonuclease subunit B
  • ATP-dependent helicase/deoxyribonuclease subunit
  • ATP-dependent helicase
  • ATP-dependent nuclease, subunit B
  • ATP-dependent exonuclease RexB
  • ATP-dependent nuclease subunit RexB
  • Second subunit of major exonuclease
• strand^?: +
• coordinates^?: 2855722..2858997
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS05680 (rexB)
(2)
D39:
SPD_RS05450 (rexB)
(2)
D39V:
SPV_RS04890 (rexB)
(19A)
Hungary19A-6:
SPH_RS05940 (rexB)
(19F)
EF3030:
EF3030_RS05685 (rexB)
(6B)^?
670-6B:
SP670_RS05945 (rexB)
(6A)
6A-10:
HKM25_RS05415 (rexB)
(5)
70585:
SP70585_RS05995 (rexB)
(19F)
A026:
T308_RS05565 (rexB)
(3)
A66:
A66_RS05180 (rexB)
(11A)
AP200:
SPAP_RS05245 (rexB)
(12F)
ASP0581:
EL334_RS05590 (rexB)
(19F)
ATCC 49619:
EL263_RS05635 (rexB)
(23F)
ATCC 700669:
SPN23F_RS05360 (rexB)
(19F)
BM6001:
ODS73_RS05750 (rexB)
(1)
BVJ1JL:
JN057_RS05760 (rexB)
(14)
CGSP14:
SPCG_RS05940 (rexB)
(19F)
G54:
SPG_RS05295 (rexB)
(1)
gamPNI0373:
HMPREF1038_RS05155 (rexB)
(3)
HU-OH:
EL271_RS05430 (rexB)
(19A)
Hu15:
SPNHU15_RS05445 (rexB)
(19A)
Hu17:
SPNHU17_RS05370 (rexB)
(1)
INV104:
INV104_RS05750 (rexB)
(14)
INV200:
SPNINV200_RS05755 (rexB)
(14)
JJA:
SPJ_RS05350 (rexB)
(19F)
MDRSPN001:
MDRSPN_RS05125 (rexB)
(1)
NCTC7465:
AT689_RS08160 (rexB)
(2)
NCTC7466:
DQM66_RS04900 (rexB)
(4)
NU83127:
EL277_RS05690 (rexB)
(3)
OXC141:
SPNOXC_RS05585 (rexB)
(1)
P1031:
SPP_RS05640 (rexB)
(2)
R6:
SPR_RS05185 (rexB)
(19A)
SP49:
BMJ42_RS06125 (rexB)
(1)
SPN032672:
SPN032672_RS00620 (rexB)
(3)
SPN034156:
SPN034156_RS00640 (rexB)
(3)
SPN034183:
SPN034183_RS05605 (rexB)
(3)
SPN994038:
SPN994038_RS05510 (rexB)
(3)
SPN994039:
SPN994039_RS05515 (rexB)
(3)
SPNA45:
SPNA45_RS07980 (rexB)
(19F)
ST556:
MYY_RS06045 (rexB)
(19F)
Taiwan19F-14:
SPT_RS05835 (rexB)
(19A)
TCH8431/19A:
HMPREF0837_RS06450 (rexB)
(4)
Xen35:
CXP32_RS05725 (rexB)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MKLLYTDIRTSLTEILTREAEELVAAGKRVFYIAPNSLSFEKERAVLEYLSQQASFSITV
  D39             MKLLYTDIRTSLTEILTREAEELVAAGKRVFYIAPNSLSFEKERAVLEYLSQQASFSITV
  D39V            MKLLYTDIRTSLTEILTREAEELVAAGKRVFYIAPNSLSFEKERAVLEYLSQQASFSITV
  Hungary19A-6    MKLLYTDIRTSLTEILTREAEELVAAGKRVFYIAPNSLSFEKERAVLEYLSQQASFSITV
  EF3030          MKLLYTDIRTSLTEILTREAEELVAAGKRVFYIAPNSLSFEKERAVLECLSQQASFSITV
                  ************************************************ ***********
  
  TIGR4           TRFAQMARYLVLNDLPAKTTLDDIGLGLAFYKCLAELDPKDLRVYGAIKQDPQLIQQLIE
  D39             TRFAQMARYLVLNDLPAKTTLDDIGLGLAFYKCLAELDPKDLRVYGAIKQDPQLIQQLIE
  D39V            TRFAQMARYLVLNDLPAKTTLDDIGLGLAFYKCLAELDPKDLRVYGAIKQDPQLIQQLIE
  Hungary19A-6    TRFAQMARYLVLNDLPAKTTLDDIGLGLAFYKCLAELDPKDLRVYGAIKQDPQLIQQLIE
  EF3030          TRFAQMARYLVLNDLPAKTILDDIGLGLAFYKCLAELNPKDLRVYGAIKQDPQLIQQLIE
                  ******************* *****************:**********************
  
  TIGR4           LYHEMTKSQMSFLDLENLTDEDKRADLLLIFEKVTAYLNQGQLAQESQLSHLIEAIENDK
  D39             LYHEMTKSQMSFLDLENLTDEDKRADLLLIFEKVTAYLNQGQLAQESQLSHLIEAIENDK
  D39V            LYHEMTKSQMSFLDLENLTDEDKRADLLLIFEKVTAYLNQGQLAQESQLSHLIEAIENDK
  Hungary19A-6    LYHEMTKSQMSFLDLENLTDEDKRADLLLIFEKVTAYLNQGQLAQGSQLSHLIEAIENDK
  EF3030          LYHEMTKSQMNFLDLENLTDEDKRADLLLIFEKVTAYLNQGQLAQGSQLSHLIEAIENDK
                  **********.********************************** **************
  
  TIGR4           VSSDFNQIALVIDGFTRFSAEEERVVDLLHGKGVEIVIGAYASKKAYTSPFSEGNLYQAS
  D39             VSSDFNQIALVIDGFTRFSAEEERVVDLLHGKGVEIVIGAYASKKAYTSPFSEGNLYQAS
  D39V            VSSDFNQIALVIDGFTRFSAEEERVVDLLHGKGVEIVIGAYASKKAYTSPFSEGNLYQAS
  Hungary19A-6    VSSDFNQIALVIDGFTRFSAEEERVVDLLHGKGVEIVIGAYASKKAYTSPFSEGNLYQAS
  EF3030          VSSDFNQIALVIDGFTRFSAEEERVVDLLHGKGVEIVIGAYASKKAYTSPFSEGNLYQAS
                  ************************************************************
  
  TIGR4           VKFLHHLASKYQTPAQDCSQTHEKMDSFDKASRLLESSYDFSELALDVDEKDRENLQIWS
  D39             VKFLHHLASKYQTPAQDCSQTHEKMDSFDKASRLLESSYDFSELALDVDEKDRENLQIWS
  D39V            VKFLHHLASKYQTPAQDCSQTHEKMDSFDKASRLLESSYDFSELALDVDEKDRENLQIWS
  Hungary19A-6    VKFLHHLASKYQTPAQDCSQTHEKMDSFDKASRLLESSYDFSELALDVDEKDRENLQIWS
  EF3030          VKFLHHLASKYQTPAQDCSQTHEKMDSFDKASRLLESSYDFSELALDVDEKDRENLQIWS
                  ************************************************************
  
  TIGR4           CLTQKEELELVARSIRQKLHENSDLSYKHFRILLGDVASYQLSLKTIFDQYQIPFYLGRS
  D39             CLTQKEELELVARSIRQKLHENSDLSYKHFRILLGDVASYQLSLKTIFDQYQIPFYLGRS
  D39V            CLTQKEELELVARSIRQKLHENSDLSYKHFRILLGDVASYQLSLKTIFDQYQIPFYLGRS
  Hungary19A-6    CLTQKEELELVARSIRQKLHENSDLSYKHFRILLGDVASYQLSLKTIFDQYQIPFYLGRS
  EF3030          CLTQKEELELVARSIRQKLHENSDLSYKHFRILLGDVASYQLSLKTIFDQYQIPFYLGRS
                  ************************************************************
  
  TIGR4           EAMAHHPLTQFVESILALKRYRFRQEDLINLLRTDLYTDLSQSDIDAFEQYIRYLGINGL
  D39             EAMAHHPLTQFVESILALKRYRFRQEDLINLLRTDLYTDLSQSDIDAFEQYIRYLGINGL
  D39V            EAMAHHPLTQFVESILALKRYRFRQEDLINLLRTDLYTDLSQSDIDAFEQYIRYLGINGL
  Hungary19A-6    EAMAHHPLTQFVESILALKRYRFRQEDLINLLRTDLYTDLSQSDIDAFEQYIRYLGINGL
  EF3030          EAMAHHPLTQFVESILALKRYRFRQEDLINLLRTDLYTDLSQSDIDAFEQYIRYLGINGL
                  ************************************************************
  
  TIGR4           PAFQQTFTKSHHGKFNLERLNVLRLRILAPLETLFASRKQKAEKLLQKWSVFLKEGAVTK
  D39             PAFQQTFTKSHHGKFNLERLNVLRLRILAPLETLFASRKQKAEKLLQKWSVFLKEGAVTK
  D39V            PAFQQTFTKSHHGKFNLERLNVLRLRILAPLETLFASRKQKAEKLLQKWSVFLKEGAVTK
  Hungary19A-6    PAFQQTFTKSHHGKFNLERLNVLRLRILAPLETLFASRKQKAENLLQKWSVFLKEGAVTK
  EF3030          PAFQQTFTKSHHGKFNLERLNVLRLRILAPLETLFASRKQKAENLLQKWSVFLKEGAVTK
                  *******************************************:****************
  
  TIGR4           QLQDLTTTLEAVEQERQAEVWKAFCHVLEQFATVFAGSQVSLEDFLALLHSGMSLSQYRT
  D39             QLQDLTTTLEAVEQERQAEVWKAFCHVLEQFATVFAGSQVSLEDFLALLHSGMSLSQYRT
  D39V            QLQDLTTTLEAVEQERQAEVWKAFCHVLEQFATVFAGSQVSLEDFLALLHSGMSLSQYRT
  Hungary19A-6    QLQDLTTTLEAVEQERQTEVWKAFCHVLEQFATVFAGSQVSLEDFLALLHSGMSLSQYRT
  EF3030          QLQDLTTTLEAVEQERQAEVWKAFCHVLEQFATVFAGSQVSLEDFLALLHSGMSLSQYRT
                  *****************:******************************************
  
  TIGR4           IPATVDTVLVQSYDLIAPLTADFVYAIGLTQDNLPKISQNTSLLTDEERQNLNQATEEGV
  D39             IPATVDTVLVQSYDLIAPLTADFVYAIGLTQDNLPKISQNTSLLTDEERQNLNQATEEGV
  D39V            IPATVDTVLVQSYDLIAPLTADFVYAIGLTQDNLPKISQNTSLLTDEERQNLNQATEEGV
  Hungary19A-6    IPATVDTVLVQSYDLIAPLTADFVYAIGLTQDNLPKISQNTSLLTDEERQNLNQTTEEGV
  EF3030          IPATVDTVLVQSYDLIAPLTADFVYAIGLTQDNLPKISQNTSLLTDEERQNLNQATEEGV
                  ******************************************************:*****
  
  TIGR4           QLLIASSENLKKNRYTMLSLVNSARKQLFLSAPSLFNESESKESAYLQELIHFGFRRREK
  D39             QLLIASSENLKKNRYTMLSLVNSARKQLFLSAPSLFNESESKESAYLQELIHFGFRRREK
  D39V            QLLIASSENLKKNRYTMLSLVNSARKQLFLSAPSLFNESESKESAYLQELIHFGFRRREK
  Hungary19A-6    QLLIASSENLKKNRYTMLSLVNSARKQLFLSAPSLFNESESKESAYLQELIHFGFRRREK
  EF3030          QLLIASSENLKKNRYTMLSLVNSARKQLFLSAPSLFNESESKESAYLQELIHFGFRRREK
                  ************************************************************
  
  TIGR4           RMNHKGLSKEDMGSYHSLLSSLVAYHQQGEMSDTEQDLTFVKVLSRVIGKKLDQQGLENP
  D39             RMNHKGLSKEDMGSYHSLLSSLVAYHQQGEMSDTEQDLTFVKVLSRVIGKKLDQQGLENP
  D39V            RMNHKGLSKEDMGSYHSLLSSLVAYHQQGEMSDTEQDLTFVKVLSRVIGKKLDQQGLENP
  Hungary19A-6    RMNHKGLSKEDMGSYHSLLSSLVAYHQQGEMSDTEQDLTFVKVLSRVIGKKLDLQGLENP
  EF3030          RMNHKGLSKEDMGSYHSLLSSLVAYHQQGEMSDTEQDLTFVKVLSRVIGKKLDQQGLENP
                  ***************************************************** ******
  
  TIGR4           AIPTSPSSKTLAKDTLQALYPAKQEFYLSTSGLTEFYRNEYSYFLRYVLGLQEELRLHPD
  D39             AIPTSPSSKTLAKDTLQALYPAKQEFYLSTSGLTEFYRNEYSYFLRYVLGLQEELRLHPD
  D39V            AIPTSPSSKTLAKDTLQALYPAKQEFYLSTSGLTEFYRNEYSYFLRYVLGLQEELRLHPD
  Hungary19A-6    AIPTSPSSKTLTKDTLQALYPAKQEFYLSTSGLTEFYLNEYSYFLRYVLGLQEELRLRPD
  EF3030          AIPTSPSSKTLAKDTLQALYPAKQEFYLSTSGLTEFYRNEYSYFLRYVLGLQEELRLHPD
                  ***********:************************* *******************:**
  
  TIGR4           ARSHGNFLHRIFERALQLPNEDSFDQRLEQAIQETSQEREFEAIYQESLEAQFTKEVLLD
  D39             ARSHGNFLHRIFERALQLPNEDSFDQRLEQAIQETSQEREFEAIYQESLEAQFTKEVLLD
  D39V            ARSHGNFLHRIFERALQLPNEDSFDQRLEQAIQETSQEREFEAIYQESLEAQFTKEVLLD
  Hungary19A-6    ARSHGNFLHRIFERALQLPNEDSFDQRLEQAIQETSQEREFEAIYQESLEAQFTKEVLLD
  EF3030          ARSHGNFLHRIFERALQLPNEDSFDQRLEQAIQETSQEREFEAIYQESLEAQFTKEVLLD
                  ************************************************************
  
  TIGR4           VARTTGHILRHNPAIETIKEEANFGGKDQAFIQLDNGRSVFVRGKVDRIDRLKANGAIGV
  D39             VARTTGHILRHNPAIETIKEEANFGGKDQAFIQLDNGRSVFVRGKVDRIDRLKANGAIGV
  D39V            VARTTGHILRHNPAIETIKEEANFGGKDQAFIQLDNGRSVFVRGKVDRIDRLKANGAIGV
  Hungary19A-6    VARTTGHILRHNPAIETIKEEANFGGKDQAFIQLDNGRSVFVRGKVDRIDRLKANGAIGV
  EF3030          VARTTGHILRHNPAIETIKEEANFGGKDQAFIQLDNGRSVFVRGKVDRIDRLKANGAIGV
                  ************************************************************
  
  TIGR4           VDYKSSLTQFQFPHFFNGLNSQLPTYLAALKREGEQNFFGAMYLEMAEPVQSLMAVKSLA
  D39             VDYKSSLTQFQFPHFFNGLNSQLPTYLAALKREGEQNFFGAMYLEMAEPVQSLMAVKSLA
  D39V            VDYKSSLTQFQFPHFFNGLNSQLPTYLAALKREGEQNFFGAMYLEMAEPVQSLMAVKSLA
  Hungary19A-6    VDYKSSLTQFQFPHFFNGLNSQLPTYLAALKREGEQNFFGAMYLEMAEPVQSLMAVKSLA
  EF3030          VDYKSSLTQFQFPHFFNGLNSQLPTYLAALKREGEQNFFGAMYLEMAEPVQSLMAVKSLA
                  ************************************************************
  
  TIGR4           GAVVEASKSMKYQGLFLEKESSYLGEFYNKNKANQLTDEEFQLLLDYNAYLYKKAAEKIL
  D39             GAVVEASKSMKYQGLFLEKESSYLGEFYNKNKANQLTDEEFQLLLDYNAYLYKKAAEKIL
  D39V            GAVVEASKSMKYQGLFLEKESSYLGEFYNKNKANQLTDEEFQLLLDYNAYLYKKAAEKIL
  Hungary19A-6    GAVVEASKSMKYQGLFLEKESSYLGEFYNKNKANQLTDEEFQLLLDYNAYLYKKAAEKIL
  EF3030          GAVVEASKSMKYQGLFLEKESSYLGEFYNKNKANQLTDEEFQLLLDYNAYLYKKAAEKIL
                  ************************************************************
  
  TIGR4           AGRFAINPYTENGRSIAPYVQQHQAITGFEANYHLGQARFLEKLDLADGKRLVGEKLKQA
  D39             AGRFAINPYTENGRSIAPYVQQHQAITGFEANYHLGQARFLEKLDLADGKRLVGEKLKQA
  D39V            AGRFAINPYTENGRSIAPYVQQHQAITGFEANYHLGQARFLEKLDLADGKRLVGEKLKQA
  Hungary19A-6    AGRFAINPYTENGRSIAPYVQQHQAITGFEANYHLGQARFLEKLDLADGKRLVGEKLKQA
  EF3030          AGRFAINPYTENGRSIAPYVQQHQAITGFEANYHLGQARFLEKLDLADGKRLVGEKLKQA
                  ************************************************************
  
  TIGR4           WLEKIREELNR
  D39             WLEKIREELNR
  D39V            WLEKIREELNR
  Hungary19A-6    WLEKIREELNR
  EF3030          WLEKIREELNR
                  ***********