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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002396000
- symbol?: pynA
- synonym:
- description?: YjjG family noncanonical pyrimidine nucleotidase
- YjjG family noncanonical pyrimidine nucleotidase
- haloacid dehalogenase-like hydrolase
- HAD superfamily (subfamily IA) hydrolase
- Putative HAD-hydrolase YfnB
- HAD superfamily hydrolase
- HAD family hydrolase
- hydrolase, haloacid dehalogenase-like family
- hydrolase, haloacid dehalogenase-like family protein
- noncanonical pyrimidine nucleotidase, YjjG family
- noncanonical pyrimidine nucleotidase, YjjG family protein
- Conserved hypothetical protein
- HAD hydrolase, TIGR02254 family
- HAD-IA family hydrolase
- Predicted hydrolase (HAD superfamily)
- Putative FMN hydrolase; 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase
- Pyrimidine 5__nucleotidase
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3061625..3063086
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MFYKFLLFDLDHTLLDFDAAEDVALTQLLKEEGVADIQAYKDYYVPMNKALWKDLELKKI
D39 MFYKFLLFDLDHTLLDFDAAEDVALTQLLKEEGVADIQAYKDYYVPMNKALWKDLELKKI
D39V MFYKFLLFDLDHTLLDFDAAEDVALTQLLKEEGVADIQAYKDYYVPMNKALWKDLELKKI
Hungary19A-6 MSYKFLLFDLDHTLLDFDAAEDVALTQLLKEEGVADIQAYKDYYVPMNKALWKDLEQKKI
EF3030 MFYKFLLFDLDHTLLDFDAAENVALTQLLKEEGVADIQAYKDYYVPMNKALWKDLELKKI
* *******************:********************************** ***
TIGR4 SKQELVNTRFSRLFAHFGQEKDGSFLAQRYQFYLAQQGQTLSGAHDLLDSLIERDYNLYA
D39 SKQELVNTRFSRLFSHFGQEKDGSFLAQRYQFYLAQQGQTLSGAHDLLDSLIERDYDLYA
D39V SKQELVNTRFSRLFSHFGQEKDGSFLAQRYQFYLAQQGQTLSGAHDLLDSLIERDYDLYA
Hungary19A-6 SKQELVNTRFSRLFAHFGQEKDGSFLAQCYQFYLAQQGQTFSGAHELLDNLIERDYELYA
EF3030 SKQELVNTRFSRLFAHFGQEKDGSFLAQRYQFYLAQQGQTLSGAHDLLDSLIERDYNLYA
**************:************* ***********:****:***.******:***
TIGR4 ATNGITAIQTGRLAQSGLAPYFNQVFISEQLQTQKPDALFYEKIGQQIAGFSKEKTLMIG
D39 ATNGITAIQTGRLAQSGLVPYFNQVFISEQLQTQKPDALFYEKIGQQIAGFSKEKTLMIG
D39V ATNGITAIQTGRLAQSGLVPYFNQVFISEQLQTQKPDALFYEKIGQQIAGFSKEKTLMIG
Hungary19A-6 ATNGITAIQTGRLAQSGLAPYFNQVFISEQLQTQKPDALFYEKIGQQIAGFSKEKTLMIG
EF3030 ATNGITAIQTGRLAQSGLAPYFNQVFISEQLQTQKPDALFYEKIGQQIAGFSKEKTLMIG
******************.*****************************************
TIGR4 DSLTADIQGGNNAGIDTIWYNPHHLENHTQAQPTYEVYSYQDLLDCLDKNILEKITF
D39 DSLTADIQGGNNAGIDTIWYNPHHLENHTQAQPTYEVYSYQDLLDCLDKNILEKITF
D39V DSLTADIQGGNNAGIDTIWYNPHHLENHTQAQPTYEVYSYQDLLDCLDKNILEKITF
Hungary19A-6 DSLTADIQGGNNAGIDTIWYNPHHLENHTQAQPTYEVHSYQDLLDYLDK-------L
EF3030 DSLTADIQGGNNAGIDTIWYNPHHLENHTQAQPTYEVYSYQDLLDCLDKNILEKITF
*************************************:******* *** :