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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002451000
- symbol?: lacE-2
- synonym:
- description?: lactose-specific PTS transporter subunit EIIC
- lactose-specific PTS transporter subunit EIIC
- PTS system, lactose-specific IIC component
- putative lactose-specific phosphotransferase system (PTS), IIBC component 2
- PTS lactose transporter subunit IIBC
- PTS system lactose-specific EIICB component
- PTS system, lactose-specific IIBC components
- Lactose-specific PTS IIBC components
- Phosphotransferase system cellobiose-specific component IIC
- PTS system, IIBC component
- PTS system, lactose-specific IIA component (EC 2.7.1.69) (pseudogene)
- PTS system, lactose-specific IIBC
- PTS system, lactose-specific IIBC component
- PTS system, lactose-specific IIB component / PTS system, lactose-specific IIC component
- pts system lactose-specific eiicb component (eiicb-lac) (eii-lac)
- PTS system lactose-specific transporter subunit IIBC
- PTS system lactose-specific transporter subunits IICB
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3040558..3042257
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MNKLIAFIEKGKPFFEKLSRNIYLRAIRDGFIAGMPVILFSSIFILIAFVPNSWGFKWSD
D39 MNKLIAFIEKGKPFFDKLSRNIYLRAIRDGFIAGMPVILFSSIFILIAFVPNSWGFKWSD
D39V MNKLIAFIEKGKPFFDKLSRNIYLRAIRDGFIAGMPVILFSSIFILIAFVPNSWGFKWSD
Hungary19A-6 MNKLIAFIEKGKPFFEKLSRNIYLRAIRDGFIAGMPVILFSSIFILIAFVPNSWGFKWSD
EF3030 MNKLIAFIEKGKPFFEKLSRNIYLRAIRDGFIAGMPVILFSSIFILIAFVPNSWGFKWSD
***************:********************************************
TIGR4 EVVAFLMKPYSYSMGILALLVAGTTAKSLTDSVNRSMEKTNQIKYMSTLLAAIVGLLMLA
D39 EVVAFLMKPYSYSMGILALLVAGTTAKSLTDSVNRSMEKTNQINYMSTLLAAIVGLLMLA
D39V EVVAFLMKPYSYSMGILALLVAGTTAKSLTDSVNRSMEKTNQINYMSTLLAAIVGLLMLA
Hungary19A-6 EVVAFLMKPYSYSMGILALLVAGTTAKSLTDSVNRSMEKTNQINYMSTLLAAIVGLLMLA
EF3030 EVVAFLMKPYSYSMGILALLVAGTTAKSLTDSVNRSMEKTNQINYMSTLLAAIVGLLMLA
*******************************************:****************
TIGR4 ADPIESGLATGFLGTKGLLSAFLAAFVTVAIYKVCVKNNVTIRMPDEVPPNISQVFKDVI
D39 ADPIENGLATGFLGTKGLLSAFLAAFVTVAIYKVCVKNNVTIRMPDEVPPNISQVFKDVI
D39V ADPIENGLATGFLGTKGLLSAFLAAFVTVAIYKVCVKNNVTIRMPDEVPPNISQVFKDVI
Hungary19A-6 ADPIENGLATGFLGTKGLLSAFLAAFVTVAIYKVCVKNNVTIRMPDEVPPNISQVFKDVI
EF3030 ADPIENGLATGFLGTKGLLSAFLAAFVTVAIYKVCVKNNVTIRMPDEVPPNISQVFKDVI
*****.******************************************************
TIGR4 PFTLSVVSLYALDLLARYFVGSSVAESIGKFFAPLFSAADGYLGITIIFGAFAFFWFVGI
D39 PFTLSVVSLYALDLLARHFVGSSVAESIGKFFAPLFSAADGYLGITIIFGAFAFFWFVGI
D39V PFTLSVVSLYALDLLARHFVGSSVAESIGKFFAPLFSAADGYLGITIIFGAFAFFWFVGI
Hungary19A-6 PFTLSVVSLYALDLLARHFVGSSVAESIGKFFAPLFSAADGYLGITIIFGAFAFFWFVGI
EF3030 PFTLSVVSLYALDLLARHFVGSSVAESIGKFFAPLFSAADGYLGITIIFGAFAFFWFVGI
*****************:******************************************
TIGR4 HGPSIVEPAIAAITYANAEVNLNLLQQGMHADKILTSGTQMFIVTMGGTGATLVVPFMFM
D39 HGPSIVEPAIAAITYANAEVNLNLLQQGMHADKILTSGTQMFIVTMGGTGATLVVPFMFM
D39V HGPSIVEPAIAAITYANAEVNLNLLQQGMHADKILTSGTQMFIVTMGGTGATLVVPFMFM
Hungary19A-6 HGPSIVEPAIAAITYANAEVNLNLLQQGMHADKILTSGTQMFIVTMGGTGATLVVPFMFM
EF3030 HGPSIVEPAIAAITYANAEVNLNLLQQGMHADKILTSGTQMFIVTMGGTGATLVVPFMFM
************************************************************
TIGR4 WLTKSKRNRAIGRASVVPTFFGVNEPILFGAPLVLNPIFFIPFIFAPIANVWIFKFFIET
D39 WLTKSKRNRAIGRASVVPTFFGVNEPILFGAPLVLNPIFFIPFIFAPIANVWIFKFFIET
D39V WLTKSKRNRAIGRASVVPTFFGVNEPILFGAPLVLNPIFFIPFIFAPIANVWIFKFFIET
Hungary19A-6 WLTKSKRNRAIGRASVVPTFFGVNEPILFGAPLVLNPIFFIPFIFAPIANVWVFKFFIET
EF3030 WLTKSKRNRAIGRASVVPTFFGVNEPILFGAPLVLNPIFFIPFIFAPIANVWIFKFFIET
****************************************************:*******
TIGR4 LGMNSFTANLPWTTPAPLGLVLGTNFQVLSFILAALLIVVDVVIYYPFLKVYDEQILEEE
D39 LGMNSFTANLPWTTPAPLGLVLGTNFQVLSFILAALLIVVDVVIYYPFLKVYDEQILEEE
D39V LGMNSFTANLPWTTPAPLGLVLGTNFQVLSFILAALLIVVDVVIYYPFLKVYDEQILEEE
Hungary19A-6 LGMNSFTANLPWTTPAPLGLVLGTNFQVLSFILAALLIVVDVVIYYPFLKVYDEQILEEE
EF3030 LGMNSFTANLPWTTPAPLGLVLGTNFQVLSFILAALLIVVDVVIYYPFLKVYDEQILEEE
************************************************************
TIGR4 RSGKSNDELKEKVAANFNTAKADAILEKAGVDAAQNTITEETNVLVLCAGGGTSGLLANA
D39 RSGKSNDELKEKVAANFNTAKADAILEKAGVDAAQNTITEETNVLVLCAGGGTSGLLANA
D39V RSGKSNDELKEKVAANFNTAKADAILEKAGVDAAQNTITEETNVLVLCAGGGTSGLLANA
Hungary19A-6 RSGKSNDELKEKVAANFNTAKADAILEKAGVEAAQNTITKETNVLVLCAGGGTSGLLANA
EF3030 RSGKSNDELKEKVAANFNTAKADAILEKVGVEAAQNTITEETNVLVLCAGGGTSGLLANA
****************************.**:*******:********************
TIGR4 LNKAAAEYNVPVKAAAGGYGAHREMLPEFDLVILAPQVASNFEDMKAETDKLGIKLAKTE
D39 LNKAAAEYNVPVKAAAGGYGAHREMLPEFDLVILAPQVASNFEDMKAETDKLGIKLAKTE
D39V LNKAAAEYNVPVKAAAGGYGAHREMLPEFDLVILAPQVASNFEDMKAETDKLGIKLAKTE
Hungary19A-6 LNKAAAEYNVPVKAAAGGYGAHREMLPEFDLVILAPQVASNFEDMKAETDKLGIKLAKTE
EF3030 LNKAAAKYNVPVKAAAGGYGAHREMLPEFDLVILAPQVASNFEDMKAETDKLGIKLAKTE
******:*****************************************************
TIGR4 GAQYIKLTRDGKGALAFVQAQFD
D39 GAQYIKLTRDGKGALAFVQAQFD
D39V GAQYIKLTRDGKGALAFVQAQFD
Hungary19A-6 GAQYIKLTRDGKGALAFVQEQFD
EF3030 GAQYIKLTRDGKGALAFVQEQFD
******************* ***