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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002455000
- symbol?: lacD
- synonym:
- description?: tagatose-bisphosphate aldolase
- tagatose-bisphosphate aldolase
- tagatose 1,6-diphosphate aldolase
- tagatose 1,6-diphosphate aldolase 2
- Tagatose-1,6-bisphosphate aldolase
- Tagatose 1,6-diphosphate aldolase (EC 4.1.2.40)
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3045772..3046752
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS00810 (lacD)
SPN034183:
SPN034183_RS05770 (lacD)
SPN994038:
SPN994038_RS05675 (lacD)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MALTEQKRVRLEKLSDENGIISALAFDQRGALKRLMVKHQTEEPTVAQMEELKVLVADEL
D39 MALTEQKRVRLEKLSDENGIISALAFDQRGALKRLMAQHQTEEPTVAQMEELKVLVADEL
Hungary19A-6 MALTEQKRVRLEKLSDENGIISALAFDQRGALKRLMAQHQTEEPTVAQMEELKVLVADEL
EF3030 MALTEQKRVRLEKLSDENGIISALAFDQRGALKRLMAQHQTEEPTVAQMEELKVLVADEL
************************************.:**********************
TIGR4 TKYASSMLLDPEYGLPATKALDEKAGLLLAYEKTGYDTTSTKRLPDCLDVWSAKRIKEEG
D39 TKYASSMLLDPEYGLPATKALDEKAGLLLAYEKTGYDTTSTKRLPDCLDVWSAKRIKEEG
Hungary19A-6 TKYASSMLLDPEYGLPATKALDEKAGLLLAYEKTGYDTTSTKRLPDCLDVWSAKRIKEEG
EF3030 TKYASSMLLDPEYGLPATKALDEKAGLLLAYEKTGYDTTSTKRLPDCLDVWSAKRIKEEG
************************************************************
TIGR4 ADAVKFLLYYDVDSSDELNQEKQAYIERIGSECVAEDIPFFLEILAYDEKIADAGSVEYA
D39 ADAVKFLLYYDVDSSDELNQEKQAYIERIGSECVAEDIPFFLEILAYDEKIADAGSVEYA
Hungary19A-6 ADAVKFLLYYDVDSSDELNQEKQAYIERIGSECVAEDIPFFLEILAYDEKIADAGSVEYA
EF3030 ADAVKFLLYYDVDSSDELNQEKQAYIERIGSECVAEDIPFFLEILAYDEKIADAGSVEYA
************************************************************
TIGR4 KVKPHKVIGAMKVFSDPRFNIDVLKVEVPVNIKYVEGFAEGEVVYTREEAAAFFKAQDEA
D39 KVKPHKVIGAMKVFSDPRFNIDVLKVEVPVNIKYVEGFAEGEVVYTREEAAAFFKAQDEA
Hungary19A-6 KVKPHKVIGAMKVFSDPRFNIDVLKVEVPVNIKYVEGFAEGEVVYTREEAAAFFKAQDEA
EF3030 KVKPHKVIGAMKVFSDPRFNIDVLKVEVPVNIKYVEGFAEGEVVYTREEAAAFFKAQDEA
************************************************************
TIGR4 TNLPYIYLSAGVSAKLFQDTLVFAHESGANFNGVLCGRATWAGSVEAYIKDGEAAARECV
D39 TNFPYIYLSAGVSAKLFQDTLVFAHESGANFNGVLCGRATWAGSVEAYIKDGEAAAREWL
Hungary19A-6 TNLPYIYLSAGVSAKLFQDTLVFAHESGANFNGVLCGRATWAGSVEAYIKDGEAAAREWL
EF3030 TNLPYIYLSAGVSAKLFQDTLVFAHESGANFNGVLCGRATWAGSVEAYIKDGEAAAREWL
**:******************************************************* :
TIGR4 RTTGFENIDELNKVLQRTATSWKERV
D39 RTTGFENIDELNKVLQTTATSWKERV
Hungary19A-6 RTTGFENIDELNKVLQRTATSWKERV
EF3030 RTTGFENIDELNKVLQTTATSWKERV
**************** *********