PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002465000
• symbol^?: vicK
• synonym:
• description^?: cell wall metabolism sensor histidine kinase VicK

  descriptions from strain specific annotations:

  • cell wall metabolism sensor histidine kinase VicK
  • sensor histidine kinase
  • sensor protein YycG
  • Histidine kinase
  • Sensor histidine kinase WalK
  • sensory box sensor histidine kinase
  • PAS domain-containing sensor histidine kinase
  • histidine kinase TCS02
  • PAS domain S-box protein
  • Sensor histidine kinase of two-component regulatory system MicAB
  • sensor kinase
  • sensory box histidine kinase VicK
  • sensory box protein
  • Signal transduction histidine kinase
  • Two-component sensor kinase SA14-24
• strand^?: -
• coordinates^?: 3158394..3159743
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS06010 (vicK)
(2)
D39:
SPD_RS05800 (vicK)
(2)
D39V:
SPV_RS05790 (vicK)
(19A)
Hungary19A-6:
SPH_RS06495 (vicK)
(19F)
EF3030:
EF3030_RS05320 (vicK)
(6B)^?
670-6B:
SP670_RS05205 (vicK)
(6A)
6A-10:
HKM25_RS05755 (vicK)
(5)
70585:
SP70585_RS06335 (vicK)
(19F)
A026:
T308_RS04690 (vicK)
(3)
A66:
A66_RS05540 (vicK)
(11A)
AP200:
SPAP_RS06185 (vicK)
(12F)
ASP0581:
EL334_RS06345 (vicK)
(19F)
ATCC 49619:
EL263_RS05985 (vicK)
(23F)
ATCC 700669:
SPN23F_RS05690 (vicK)
(19F)
BM6001:
ODS73_RS06420 (vicK)
(1)
BVJ1JL:
JN057_RS06115 (vicK)
(14)
CGSP14:
SPCG_RS05575 (vicK)
(19F)
G54:
SPG_RS05630 (vicK)
(1)
gamPNI0373:
HMPREF1038_RS06050 (vicK)
(3)
HU-OH:
EL271_RS06155 (vicK)
(19A)
Hu15:
SPNHU15_RS05960 (vicK)
(19A)
Hu17:
SPNHU17_RS05885 (vicK)
(1)
INV104:
INV104_RS06080 (vicK)
(14)
INV200:
SPNINV200_RS05410 (vicK)
(14)
JJA:
SPJ_RS05675 (vicK)
(19F)
MDRSPN001:
MDRSPN_RS04290 (vicK)
(1)
NCTC7465:
AT689_RS07795 (vicK)
(2)
NCTC7466:
DQM66_RS05800 (vicK)
(4)
NU83127:
EL277_RS06035 (vicK)
(3)
OXC141:
SPNOXC_RS05915 (vicK)
(1)
P1031:
SPP_RS06255 (vicK)
(2)
R6:
SPR_RS05520 (vicK)
(19A)
SP49:
BMJ42_RS06465 (vicK)
(1)
SPN032672:
SPN032672_RS00950 (vicK)
(3)
SPN034156:
SPN034156_RS00970 (vicK)
(3)
SPN034183:
SPN034183_RS05930 (vicK)
(3)
SPN994038:
SPN994038_RS05835 (vicK)
(3)
SPN994039:
SPN994039_RS05840 (vicK)
(3)
SPNA45:
SPNA45_RS05415 (vicK)
(19F)
ST556:
MYY_RS05165 (vicK)
(19F)
Taiwan19F-14:
SPT_RS04950 (vicK)
(19A)
TCH8431/19A:
HMPREF0837_RS06115 (vicK)
(4)
Xen35:
CXP32_RS06075 (vicK)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MLDLLKQTIFTRDFIFILILLGFILVVTLLLLENRRDNIQLKQVNQKVKDLIAGDYSKVL
  D39             MLDLLKQTIFTRDFIFILILLGFILVVTLLLLENRRDNIQLKQINQKVKDLIAGDYSKVL
  D39V            MLDLLKQTIFTRDFIFILILLGFILVVTLLLLENRRDNIQLKQINQKVKDLIAGDYSKVL
  Hungary19A-6    MLDLLKQTIFTRDFIFILILLGFILVVTLLLLENRRDNIQLKQINQKVKDLIAGDYSKVL
  EF3030          MLDLLKQTIFTRDFIFILILLGFILVVTLLLLENRRDNIQLKQINQKVKDLIAGDYSKVL
                  *******************************************:****************
  
  TIGR4           DMQGGSEITNITNNLNDLSEVIRLTQENLEQESKRLNSILFYMTDGVLATNRRGQIIMIN
  D39             DMQGGSEITNITNNLNDLSEVIRLTQENLEQESKRLNSILFYMTDGVLATNRRGQIIMIN
  D39V            DMQGGSEITNITNNLNDLSEVIRLTQENLEQESKRLNSILFYMTDGVLATNRRGQIIMIN
  Hungary19A-6    DMQGGSEITNITNNLNDLSEVIRLTQENLEQESKRLNSILFYMTDGVLATNRRGQIIMIN
  EF3030          DMQGGSEITNITNNLNDLSEVIRLTQENLEQESKRLNSILFYMTDGVLATNRRGQIIMIN
                  ************************************************************
  
  TIGR4           DTAKKQLGLVKEDVLNRSILELLKIEENYELRDLITQSPELLLDSQDINGEYLNLRVRFA
  D39             DTAKKQLGLVKEDVLNRSILELLKIEENYELRDLITQSPELLLDSQDINGEYLNLRVRFA
  D39V            DTAKKQLGLVKEDVLNRSILELLKIEENYELRDLITQSPELLLDSQDINGEYLNLRVRFA
  Hungary19A-6    DTAKKQLGLVKEDVLNRSILELLKIEENYELRDLITQSPELLLDSQDINGEYLNLRVRFA
  EF3030          DTAKKQLGLVKEDVLNRSILELLKIEENYELRDLITQSPELLLDSQDINGEYLNLRVRFA
                  ************************************************************
  
  TIGR4           LIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALC
  D39             LIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALC
  D39V            LIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALC
  Hungary19A-6    LIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALC
  EF3030          LIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALC
                  ************************************************************
  
  TIGR4           ETVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSHLDVELINFTAFITFILNRFDKMK
  D39             ETVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSHLDVELINFTAFITFILNRFDKMK
  D39V            ETVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSHLDVELINFTAFITFILNRFDKMK
  Hungary19A-6    ETVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSHLDVELINFTAFITFILNRFDKMK
  EF3030          ETVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSHLDVELINFTAFITFILNRFDKMK
                  ************************************************************
  
  TIGR4           GQEKEKKYELVRDYPINSIWMEIDTDKMTQVVDNILNNAIKYSPDGGKITVRMKTTEDQM
  D39             GQEKEKKYELVRDYPINSIWMEIDTDKMTQVVDNILNNAIKYSPDGGKITVRMKTTEDQM
  D39V            GQEKEKKYELVRDYPINSIWMEIDTDKMTQVVDNILNNAIKYSPDGGKITVRMKTTEDQM
  Hungary19A-6    GQEKEKKYELVRDYPINSIWMEIDTDKMTQVVDNILNNAIKYSPDGGKITVRMKTTEDQM
  EF3030          GQEKEKKYELVRDYPINSIWMEIDTDKMTQVVDNILNNAIKYSPDGGKITVRMKTTEDQM
                  ************************************************************
  
  TIGR4           ILSISDHGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLGLSIAKEIIKQHKGFIWAKSE
  D39             ILSISDHGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLGLSIAKEIIKQHKGFIWAKSE
  D39V            ILSISDHGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLGLSIAKEIIKQHKGFIWAKSE
  Hungary19A-6    ILSISDHGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLGLSIAKEIIKQHKGFIWAKSE
  EF3030          ILSISDHGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLGLSIAKEIIKQHKGFIWAKSE
                  ************************************************************
  
  TIGR4           YGKGSTFTIVLPYDKDAVKEEVWEDEVED
  D39             YGKGSTFTIVLPYDKDAVKEEVWEDEVED
  D39V            YGKGSTFTIVLPYDKDAVKEEVWEDEVED
  Hungary19A-6    YGKGSTFTIVLPYDKDAVKEEVWEDEVED
  EF3030          YGKGSTFTIVLPYDKDAVKEEVWEDEVED
                  *****************************