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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002508000
- symbol?: leuD
- synonym:
- description?: 3-isopropylmalate dehydratase small subunit
- 3-isopropylmalate dehydratase small subunit
- putative 3-isopropylmalate dehydratase small subunit
- 3-isopropylmalate dehydratase small subunit (isopropylmalate isomerase) (alpha-ipm isomerase) (ipmi)
- putative 3-isopropylmalate dehydratase, small subunit
- 3-isopropylmalate dehydratase, small subunit
- 3-isopropylmalate dehydratase, small subunit, putative
- 3-isopropylmalate dehydratase small subunit, putative
- 3-isopropylmalate dehydratase small subunit, truncation
- 3-isopropylmalate dehydratase small subunit domain protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3213666..3214025
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(14)
INV200:
SPNINV200_RS05270 (leuD)
(14)
JJA:
SPJ_RS05815 (leuD)
(19F)
MDRSPN001:
MDRSPN_RS04150 (leuD)
(3)
SPN034183:
SPN034183_RS06070 (leuD)
(3)
SPN994038:
SPN994038_RS05975 (leuD)
(3)
SPN994039:
SPN994039_RS05980 (leuD)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MAGSSREYAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLAQLKPTDQ
D39 MVGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLAQLKPTDQ
D39V MVGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLAQLKPTDQ
Hungary19A-6 MAGSSREHAAWALANYGFKVVIAGTFGDIHYNNELNNGMLPIVQPREVREKLAQLKPTDH
EF3030 MAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPIVQPREVREKLAQLKPTDQ
*.*****:******:*********:**********************************:
TIGR4 VTVDLEQQKIISPVEEFTFEIDSEWKHKLLNSLDDIGITLQYEELIAAYEKQRPAYWQD
D39 VTVDLEQQKIISPVEEFTFEIDSKWKHKLLNSLDDIGITLQYEELIAAYEKQRPAYWQD
D39V VTVDLEQQKIISPVEEFTFEIDSKWKHKLLNSLDDIGITLQYEELIAAYEKQRPAYWQD
Hungary19A-6 VTVDLEQQKIISPVEEFTFEIDSEWKHKLLNSLDDIGITLQYEELIAAYEKQRPAYWQD
EF3030 VTVDLEQQKIISPVEEFTFEIDSEWKHKLLNSLDDIGITLQYEELIAAYEKQRPAYWQD
***********************:***********************************