PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002567000
• symbol^?: ffh
• synonym:
• description^?: signal recognition particle protein

  descriptions from strain specific annotations:

  • signal recognition particle protein
  • signal recognition particle
  • Signal recognition particle (Fifty four homolog)
  • Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
  • Signal recognition particle GTPase
  • Signal recognition particle protein Ffh
  • signal recognition particle protein Srp54
  • pseudogene
• strand^?: -
• coordinates^?: 3303827..3305399
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS06310 (ffh)
(2)
D39:
SPD_RS06095 (ffh)
(2)
D39V:
SPV_RS06090 (ffh)
(19A)
Hungary19A-6:
SPH_RS06900 (ffh)
(19F)
EF3030:
EF3030_RS06185 (ffh)
(6B)^?
670-6B:
SP670_RS04885 (ffh)
(6A)
6A-10:
HKM25_RS06040 (ffh)
(5)
70585:
SP70585_RS06715 (ffh)
(19F)
A026:
T308_RS04400 (ffh)
(3)
A66:
A66_RS05860 (ffh)
(11A)
AP200:
SPAP_RS06490 (ffh)
(12F)
ASP0581:
EL334_RS06635 (ffh)
(19F)
ATCC 49619:
EL263_RS06275 (ffh)
(23F)
ATCC 700669:
SPN23F_RS05990 (ffh)
(19F)
BM6001:
ODS73_RS06705 (ffh)
(1)
BVJ1JL:
JN057_RS06405 (ffh)
(14)
CGSP14:
SPCG_RS06475 (ffh)
(19F)
G54:
SPG_RS05925 (ffh)
(1)
gamPNI0373:
HMPREF1038_RS06330 (ffh)
(3)
HU-OH:
EL271_RS06445 (ffh)
(19A)
Hu15:
SPNHU15_RS06370 (ffh)
(19A)
Hu17:
SPNHU17_RS06305 (ffh)
(1)
INV104:
INV104_RS06375 (ffh)
(14)
INV200:
SPNINV200_RS06290 (ffh)
(14)
JJA:
SPJ_RS05975 (ffh)
(19F)
MDRSPN001:
MDRSPN_RS03995 (ffh)
(1)
NCTC7465:
AT689_RS07505 (ffh)
(2)
NCTC7466:
DQM66_RS06095 (ffh)
(4)
NU83127:
EL277_RS06330 (ffh)
(3)
OXC141:
SPNOXC_RS06210 (ffh)
(1)
P1031:
SPP_RS06545 (ffh)
(2)
R6:
SPR_RS05820 (ffh)
(19A)
SP49:
BMJ42_RS06760 (ffh)
(1)
SPN032672:
SPN032672_RS01245 (ffh)
(3)
SPN034156:
SPN034156_RS01265 (ffh)
(3)
SPN034183:
SPN034183_RS06225 (ffh)
(3)
SPN994038:
SPN994038_RS06130 (ffh)
(3)
SPN994039:
SPN994039_RS06135 (ffh)
(3)
SPNA45:
SPNA45_RS05095 (ffh)
(19F)
ST556:
MYY_RS04875 (ffh)
(19F)
Taiwan19F-14:
SPT_RS04660 (ffh)
(19A)
TCH8431/19A:
HMPREF0837_RS05825 (ffh)
(4)
Xen35:
CXP32_RS06370 (ffh)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MAFESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERA
  D39             MAFESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERA
  D39V            MAFESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERA
  Hungary19A-6    MAFESLTERLQNVFKSLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERA
  EF3030          MAFESLTERLQNVFKSLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERA
                  ***************.********************************************
  
  TIGR4           VGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGK
  D39             VGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGK
  D39V            VGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGK
  Hungary19A-6    VGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGK
  EF3030          VGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGK
                  ************************************************************
  
  TIGR4           LANKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQA
  D39             LANKLKKEENARPLMVAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQA
  D39V            LANKLKKEENARPLMVAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQA
  Hungary19A-6    LANKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQA
  EF3030          LANKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQA
                  ***************:********************************************
  
  TIGR4           QTNHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQ
  D39             QTNHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQ
  D39V            QTNHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQ
  Hungary19A-6    QTNHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQ
  EF3030          QTNHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQ
                  ************************************************************
  
  TIGR4           LEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGD
  D39             LEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGD
  D39V            LEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGD
  Hungary19A-6    LEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGD
  EF3030          LEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGD
                  ************************************************************
  
  TIGR4           MLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMANN
  D39             MLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMANN
  D39V            MLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMANN
  Hungary19A-6    MLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMANN
  EF3030          MLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMANN
                  ************************************************************
  
  TIGR4           PALQNMKVDERQIARKRAIVSSMTPEERENPDLLNPSRRRRIAAGSGNTFVEVNKFIKDF
  D39             PALQNMKVDERQIARKRAIVSSMTPEERENPDLLNPSRRRRIAAGSGNTFVEVNKFIKDF
  D39V            PALQNMKVDERQIARKRAIVSSMTPEERENPDLLNPSRRRRIAAGSGNTFVEVNKFIKDF
  Hungary19A-6    PALQNMKVDERQIARKRAIVSSMTPEERENPDLLNPSRRRRIAAGSGNTFVEVNKFIKDF
  EF3030          PALQNMKVDERQIARKRAIVSSMTPEERENPDLLNPSRRRRIAAGSGNTFVEVNKFIKDF
                  ************************************************************
  
  TIGR4           NQAKQLMQGVMSGDMNKMMKQMGINPNNLPKNMPNMGGMDMSALEGMMGQGGMPDLSALG
  D39             NQAKQLMQGVMSGDMNKMMKQMGINPNNLPKNMPNMGGMDMSALEGMMGQGGMPDLSALG
  D39V            NQAKQLMQGVMSGDMNKMMKQMGINPNNLPKNMPNMGGMDMSALEGMMGQGGMPDLSALG
  Hungary19A-6    NQAKQLMQGVMSGDMNKMMKQMGINPNNLPKNMPNMGGMDMSALEGMMGQGGMPDLSALG
  EF3030          NQAKQLMQGVMSGDMNKMMKQMGINPNNLPKNMPNMGGMDMSALEGMMGQGGMPDLSALG
                  ************************************************************
  
  TIGR4           GAGMPDMSQMFGGGLKGKIGEFAMKQSMKRMANKMKKAKKKRK
  D39             GAGMPDMSQMFGGGLKGKIGEFAMKQSMKRMANKMKKAKKKRK
  D39V            GAGMPDMSQMFGGGLKGKIGEFAMKQSMKRMANKMKKAKKKRK
  Hungary19A-6    GAGMPDMSQMFGGGLKGKIGEFAMKQSMKRMANKMKKAKKKRK
  EF3030          GAGMPDMSQMFGGGLKGKIGEFAMKQSMKRMANKMKKAKKKRK
                  *******************************************