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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002571000
- symbol?: yidA
- synonym:
- description?: sugar phosphatase
- sugar phosphatase
- haloacid dehalogenase-like hydrolase
- phosphatase YidA
- Cof family protein
- Putative phosphatase
- hydrolase
- sugar phosphate phosphatase
- Cof-like hydrolase
- Cof-type HAD-IIB family hydrolase
- Conserved hypothetical protein
- Predicted hydrolases of the HAD superfamily
- Promiscuous sugar phosphatase YidA, haloacid dehalogenase-like phosphatase family
- Sugar phosphatase YidA
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3307600..3308406
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS06655 (yidA)
(19F)
ATCC 49619:
EL263_RS06295 (yidA)
(23F)
ATCC 700669:
SPN23F_RS06010 (yidA)
(14)
INV200:
SPNINV200_RS06310 (yidA)
(14)
JJA:
SPJ_RS05995 (yidA)
(19F)
MDRSPN001:
MDRSPN_RS03975 (yidA)
(19A)
SP49:
BMJ42_RS06780 (yidA)
(1)
SPN032672:
SPN032672_RS01265 (yidA)
(3)
SPN034156:
SPN034156_RS01285 (yidA)
(3)
SPN034183:
SPN034183_RS06245 (yidA)
(3)
SPN994038:
SPN994038_RS06150 (yidA)
(3)
SPN994039:
SPN994039_RS06155 (yidA)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSIKLIAVDIDGTLVNSQKEITPEVFSAIQDAKEAGVKVVIATGRPIAGVAKLLDDLQLR
D39 MSIKLIAVDIDGTLVNSQKEITPEVFSAIQDAKEAGVKVVIATGRPIAGVAKLLDDLQLR
D39V MSIKLIAVDIDGTLVNSQKEITPEVFSAIQDAKEAGVKVVIATGRPIAGVAKLLDDLQLR
Hungary19A-6 MSIKLIAVDIDGTLVNSQKEITPEVFSAIQDAKEAGIKVVIATGRPIAGVAKLLDDLQLR
EF3030 MSIKLIAVDIDGTLVNSQKEITPEVFSAIQDAKEAGVKVVIATGRPIAGVAKLLDDLQLR
************************************:***********************
TIGR4 DEGDYVVTFNGALVQETATGHEIISESLTYEDYLDMEFLSRKLGVHMHAITKDGIYTANR
D39 DQGDYVVTFNGALVQETATGHEIISESLTYEDYLDMEFLSRKLGVHMHAITKDGIYTANR
D39V DQGDYVVTFNGALVQETATGHEIISESLTYEDYLDMEFLSRKLGVHMHAITKDGIYTANR
Hungary19A-6 DQGDYVVTFNGALVQETATGHEIISESLTYEDYLDMEFLSRKLGVHMHAITKDGIYTANR
EF3030 DEGDYVVTFNGALVQETATGHEIISESLTYEDYLDMEFLSRKLGVHMHAITKDGIYTANR
*:**********************************************************
TIGR4 NIGKYTVHESTLVSMPIFYRTPEEMAGKEIVKCMFIDEPEILDAAIEKIPAEFYERYSIN
D39 NIGKYTVHESTLVSMPIFYRTPEEMAGKEIVKCMFIDEPEILDAAIEKIPAEFYEHYSIN
D39V NIGKYTVHESTLVSMPIFYRTPEEMAGKEIVKCMFIDEPEILDAAIEKIPAEFYEHYSIN
Hungary19A-6 NIGTYTVHESTLVSMPIFYRTPEEMAGKEIVKCMFIDEPEILDAAIEKIPAEFYERYSIN
EF3030 NIGKYTVHESTLVSMPIFYRTPEEMADKEIVKCMFIDEPEILDATIEKIPAEFYERYSIN
***.**********************.*****************:**********:****
TIGR4 KSAPFYLELLKKNVDKGSAITHLAEKLGLTKDETMAIGDEENDRAMLEVVGNPVVMENGN
D39 KSAPFYLELLKKNVDKGSAITHLAEKLGLTKDETMAIGDEENDRAMLEVVGNPVVMENGN
D39V KSAPFYLELLKKNVDKGSAITHLAEKLGLTKDETMAIGDEENDRAMLEVVGNPVVMENGN
Hungary19A-6 KSAPFYLELLKKNVDKGSAITHLAEKLGLTKDETMAIGDEENDRAMLEVVGNPVVMENGN
EF3030 KSAPFYLELLTKNVDKGSAITHLAEKLGLTKDETMAIGDEENDRAMLEVVGNPVVMENGN
**********.*************************************************
TIGR4 PEIKKIAKYITKTNDESGVAHAIRTWVL
D39 PEIKKIAKYITKTNDESGVAHAIRTWVL
D39V PEIKKIAKYITKTNDESGVAHAIRTWVL
Hungary19A-6 PEIKKIAKYITKTNDESGVAHAIRTWVL
EF3030 PEIKKIAKYITKTNDESGVAHAIRTWVL
****************************