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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 24-APR-2025

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae Hungary19A-6
  • locus tag: SPH_RS06920 [old locus tag: SPH_1432 ]
  • pan locus tag?: PNEUPAN002571000
  • symbol: yidA
  • pan gene symbol?: yidA
  • synonym:
  • product: sugar-phosphatase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPH_RS06920 [old locus tag: SPH_1432 ]
  • symbol: yidA
  • product: sugar-phosphatase
  • replicon: chromosome
  • strand: +
  • coordinates: 1328366..1329172
  • length: 807
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_010380 (1328366..1329172) NCBI
  • BioCyc: SPH_RS06920 BioCyc
  • MicrobesOnline: see SPH_1432
  • PneumoBrowse for strain D39V: SPV_1146 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGAGTATTAAACTAATTGCCGTCGATATTGACGGAACCCTAGTCAACAGCCAAAAGGAA
    ATCACTCCTGAAGTCTTTTCTGCCATCCAAGATGCCAAAGAAGCTGGTATTAAAGTCGTG
    ATTGCAACTGGCCGCCCCATCGCAGGTGTTGCCAAACTTCTGGACGACTTGCAGTTGAGA
    GACCAAGGTGACTATGTGGTGACCTTCAACGGTGCCCTTGTCCAAGAAACTGCTACTGGC
    CATGAGATTATCAGCGAATCCTTGACCTATGAGGATTATCTGGATATGGAATTTCTCAGT
    CGCAAGCTTGGTGTTCACATGCATGCTATTACTAAGGACGGTATCTATACTGCAAATCGC
    AATATCGGAACATACACTGTACACGAATCAACCCTCGTCAGCATGCCTATCTTCTACCGC
    ACTCCTGAAGAAATGGCTGGCAAAGAAATTGTTAAATGTATGTTTATTGATGAACCAGAG
    ATTCTCGATGCTGCGATTGAAAAGATACCAGCAGAATTTTACGAACGCTACTCCATCAAC
    AAATCTGCTCCTTTCTACCTCGAACTCCTTAAAAAGAATGTAGACAAGGGTTCAGCTATT
    ACTCACTTAGCTGAAAAACTAGGATTAACCAAAGATGAAACCATGGCTATCGGAGACGAA
    GAAAATGACCGTGCCATGCTGGAAGTCGTTGGCAACCCTGTAGTCATGGAAAACGGAAAT
    CCAGAAATCAAAAAAATCGCCAAATACATCACGAAAACAAATGACGAATCCGGCGTTGCC
    CACGCCATCCGAACATGGGTACTGTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    807

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPH_RS06920 [old locus tag: SPH_1432 ]
  • symbol: YidA
  • description: sugar-phosphatase
  • length: 268
  • theoretical pI: 4.60542
  • theoretical MW: 29740.9
  • GRAVY: -0.135448

⊟Function[edit | edit source]

  • reaction:
    EC 3.1.3.23?  ExPASy
    Sugar-phosphatase Sugar phosphate + H2O = sugar + phosphate
  • TIGRFAM:
    Unknown function Enzymes of unknown specificity Cof-like hydrolase (TIGR00099; HMM-score: 221)
    and 22 more
    Unknown function Enzymes of unknown specificity HAD hydrolase, family IIB (TIGR01484; HMM-score: 116.7)
    phosphoglycolate phosphatase, TA0175-type (TIGR01487; EC 3.1.3.18; HMM-score: 102.8)
    sucrose-phosphate phosphatase subfamily (TIGR01482; EC 3.1.3.-; HMM-score: 95.2)
    mannosyl-3-phosphoglycerate phosphatase family (TIGR01486; EC 3.1.3.-; HMM-score: 58.1)
    mannosyl-3-phosphoglycerate phosphatase (TIGR02461; EC 3.1.3.70; HMM-score: 46.1)
    Cell structure Cell envelope Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (TIGR01670; EC 3.1.3.45; HMM-score: 43.3)
    Unknown function General mannosyl-3-phosphoglycerate phosphatase homolog (TIGR02463; EC 3.1.3.-; HMM-score: 42.9)
    Unknown function Enzymes of unknown specificity HAD hydrolase, family IIIA (TIGR01662; HMM-score: 34)
    Unknown function Enzymes of unknown specificity HAD phosphoserine phosphatase-like hydrolase, family IB (TIGR01488; HMM-score: 33.4)
    phosphoserine phosphatase-like hydrolase, archaeal (TIGR01491; HMM-score: 33.1)
    sucrose phosphatase (TIGR01485; EC 3.1.3.24; HMM-score: 30.8)
    sucrose-phosphate synthase, sucrose phosphatase-like domain (TIGR02471; HMM-score: 30.2)
    Unknown function Enzymes of unknown specificity HAD hydrolase, family IB (TIGR01490; HMM-score: 23.9)
    Metabolism Amino acid biosynthesis Serine family phosphoserine phosphatase SerB (TIGR00338; EC 3.1.3.3; HMM-score: 21.9)
    Metabolism Energy metabolism Anaerobic phenylphosphate carboxylase, delta subunit (TIGR02726; HMM-score: 19.2)
    Metabolism Energy metabolism Sugars phosphoglycolate phosphatase, bacterial (TIGR01449; EC 3.1.3.18; HMM-score: 18.2)
    HAD phosphatase, family IIIA (TIGR01668; EC 3.1.3.-; HMM-score: 16.3)
    Unknown function Enzymes of unknown specificity HAD hydrolase, family IIA (TIGR01460; HMM-score: 15.6)
    Metabolism Central intermediary metabolism Other 2,3-diketo-5-methylthio-1-phosphopentane phosphatase (TIGR01489; HMM-score: 12.7)
    phosphonatase-like hydrolase (TIGR03351; HMM-score: 12.5)
    Unknown function Enzymes of unknown specificity HAD hydrolase, family IA, variant 3 (TIGR01509; HMM-score: 12.4)
    histidinol-phosphate phosphatase domain (TIGR01656; HMM-score: 12.2)
  • TheSEED: see SPH_1432
  • PFAM:
    HAD (CL0137) Hydrolase_3; haloacid dehalogenase-like hydrolase (PF08282; HMM-score: 220.2)
    and 5 more
    S6PP; Sucrose-6F-phosphate phosphohydrolase (PF05116; HMM-score: 61.9)
    Hydrolase; haloacid dehalogenase-like hydrolase (PF00702; HMM-score: 38.8)
    HAD; haloacid dehalogenase-like hydrolase (PF12710; HMM-score: 29)
    HAD_2; haloacid dehalogenase-like hydrolase (PF13419; HMM-score: 22.2)
    Hydrolase_6; haloacid dehalogenase-like hydrolase (PF13344; HMM-score: 21.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9998
    • Cytoplasmic Membrane Score: 0.0001
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0001
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003464
    • TAT(Tat/SPI): 0.000183
    • LIPO(Sec/SPII): 0.000468
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MSIKLIAVDIDGTLVNSQKEITPEVFSAIQDAKEAGIKVVIATGRPIAGVAKLLDDLQLRDQGDYVVTFNGALVQETATGHEIISESLTYEDYLDMEFLSRKLGVHMHAITKDGIYTANRNIGTYTVHESTLVSMPIFYRTPEEMAGKEIVKCMFIDEPEILDAAIEKIPAEFYERYSINKSAPFYLELLKKNVDKGSAITHLAEKLGLTKDETMAIGDEENDRAMLEVVGNPVVMENGNPEIKKIAKYITKTNDESGVAHAIRTWVL

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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