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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002656000
- symbol?: —
- synonym:
- description?: putative membrane protein (pseudogene)
- putative membrane protein (pseudogene)
- membrane protein, putative
- putative membrane protein
- ABC transporter membrane protein
- membrane protein
- ABC transporter permease
- ABC transporter permease protein
- conserved hypothetical membrane protein
- conserved hypothetical protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3511321..3512967
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MRLKVIKKLVDINILYSSQEANLANLRKKQAKNPGKKVNVSARVLSSYIFSSLLMIICFS
D39 MRLKVIKKLVDINILYSSQEANLANLRKKQAKNPGKKVNVSARVLSSYIFSSLLMIICFS
D39V MRLKVIKKLVDINILYSSQEANLANLRKKQAKNPGKKVNVSARVLSSYIFSSLLMIICFS
Hungary19A-6 MRLKVIKKLVDINILYSSQEANLANLRKKQAKNPGKKVNVSARVLSSYIFSSLLMLICFS
EF3030 MRLKVIKKLVDINILYSSQEANLANLRKKQAKNPGKKVNVSARVLSSYIFSSLLMLICFS
*******************************************************:****
TIGR4 NIAIHFPFEEIPIYFSSMIAILLVIAFSTSLTAFYNVFYESKDLVSYRPYAFKESEIIIA
D39 NIAIHFPFEEIHIYFSSMIAILLVIAFSTSLTAFYNVFYESKDLISYRPYAFKESEIIIA
D39V NIAIHFPFEEIHIYFSSMIAILLVIAFSTSLTAFYNVFYESKDLISYRPYAFKESEIIIA
Hungary19A-6 NIAIHFPFEEIPIYFSSMVAILLVLAFSTSFTAFYNVFYESKDLASYRPYAFKESEIIMA
EF3030 NIAIHFPFEEIPIYFSSMVAILLVIAFSTSLTAFYNVFYESKDLASYRPYAFKESEIIIA
*********** ******:*****:*****:************* *************:*
TIGR4 KGLSVLLPALTGIVPILAYFLVLYIRLAPSLWLGLPLMLLSLTLLFVSVALVMVVAVHFL
D39 KGLSVLLPALTGIVPILAYFLVLYIRLAPSLWLGLPLMLLSLTLLFVSVALVMVVAVHFL
D39V KGLSVLLPALTGIVPILAYFLVLYIRLAPSLWLGLPLMLLSLTLLFVSVALVMVVAVHFL
Hungary19A-6 KGLSVLLPALAGIVPILAYFLVLYIRLAPSLWLGLPLMLLSLTLLFVSVTLVMVVAVHFL
EF3030 KGLSVLLPALTGIVPILAYFLVLYIRLAPSLWLGLPLMLLSLTLLFVSVALVMVVAVHFL
**********:**************************************:**********
TIGR4 AQTRVFRKYQSIFSNVMIGIGVLIPLIFIFFLQSTFGSIVDKVRDIPFLLYPLHIFYKIA
D39 AQTRVFRKYQSIFSNVMIGIGVLIPLIFIFFLQSTFGSIVDKVRDIPFLLYPLHIFYKIA
D39V AQTRVFRKYQSIFSNVMIGIGVLIPLIFIFFLQSTFGSIVDKVRDIPFLLYPLHIFYKIA
Hungary19A-6 AQTTVFRKYQSIFSNVMIGIGVLIPLIFIFFLQSTFGSIVDKVRDIPFLLYPLHIFYKIA
EF3030 AQTTVFRKYQSIFSNVMIGIGVLIPLIFVFFLQSTFGSIVDKVRDIPFLLYPLHIFYKIA
*** ************************:*******************************
TIGR4 VEPFSTEALVGLLAWIGLTLFLLYLTKKKVLPRFYDVILLNSEEKVKKERRSKERISTTK
D39 VEPFSTEALVGLLAWIGLTLFLLYLTKKKVLPRFYDVILLNSEDKVKKERRSKERISTTK
D39V VEPFSTEALVGLLAWIGLTLFLLYLTKKKVLPRFYDVILLNSEDKVKKERRSKERISTTK
Hungary19A-6 VEPFSTEAILGLLAWIGLTLFLLYLTKKKVLPRFYDVILLNSEEKVKKERRSKERISTTK
EF3030 VEPFSIEAILGLLAWIALTVFLLYLTKKKVLPRFYDVILLNSEEKVKKERRSKERISTTK
***** **::******.**:***********************:****************
TIGR4 KGFFRMVLRYHLTLLGQGTGVITVLFTSAFLPYLMMIGLISKIRDSQIVPDIHPPYWLPL
D39 KGFFRMVLRYHLTLLGQGTGVVTVLFTSAFLPYLMMIGLISKIRDSQIVPDIHPPYWLPL
D39V KGFFRMVLRYHLTLLGQGTGVVTVLFTSAFLPYLMMIGLISKIRDSQIVPDIHPPYWLPL
Hungary19A-6 KGFFRMVLRYHLTLLGQGTGVVTVLFTSAFFPYLMMIGLISKIRDSQIVPDIHPPYWLPL
EF3030 KGFFRMVLRYHLTLLGQGTGVITVLFTSAFLPYLMMISLISKIRDSQIVPDIHPPYWLPL
*********************:********:******.**********************
TIGR4 FFIALFIAVVNNNITSLHSIALSLERENVDFLKSLPFDFARYVKVKFWIIYAVQSFLPVL
D39 FFIALFIAVVNNNITSLHSIALSLERENVDFLKSLPFDFARYVKVKFWIIYAVQSFLPIL
D39V FFIALFIAVVNNNITSLHSIALSLERENVDFLKSLPFDFARYVKVKFWIIYAVQSFLPIL
Hungary19A-6 FFVGVFIAVVNNNITSLHSIALSLERENVDFLKSLPFDFARYVKVKFWIIYAVQSFLPVL
EF3030 FFVGVFIAVVNNNITSLHSIALSLERENLDFLKSLPFDFARYVKVKFWIIYAVQSFLPIL
**:.:***********************:*****************************:*
TIGR4 TLLGLSLYLGLPIISMIYLLVVWIIASVILSCHHYFKDVKNLSTNWSSITDLVNRSNGIV
D39 TLLGLSLYLGLPIISMIYLIVAWILASVILSCHHYFKDVKNLSTNWSSITDLVNRSNGIV
D39V TLLGLSLYLGLPIISMIYLIVAWILASVILSCHHYFKDVKNLSTNWSSITDLVNRSNGIV
Hungary19A-6 TLLGLSLYLGLPIISMIYLIVAWILASVILSCHHYFKDVKNLSTNWSSITDLVNRSNGIV
EF3030 TLLGLSLYLGLSILSMIYLLVVWIIASVILSCHHYFKDVKNLSTNWSSITDLVNRSNGIV
***********.*:*****:*.**:***********************************
TIGR4 AIVLLFIYSAILMALVIGSIFLVQSLSPILAISLGVGALIVLLALAIFGYHYYLSRILAE
D39 AIVLLFIYSAILMALVIGSIFLVQSLSTILAISLGVGALILLLALAIFGYHYYLSRILAE
D39V AIVLLFIYSAILMALVIGSIFLVQSLSTILAISLGVGALILLLALAIFGYHYYLSRILAE
Hungary19A-6 AIVLLFIYSAILMALVIGSIFLVQSLSTILAISLGVGALILLLALAIFGYHYYLSRILAE
EF3030 AIVLLFIYSAILMALVIGSIFLVQSLSPILAINLGVGALIVLLALAIFGYHYYLSRILAE
***************************.****.*******:*******************
TIGR4 IEKR
D39 IEKR
D39V IEKR
Hungary19A-6 IEKR
EF3030 IEKR
****