PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002752000
• symbol^?: pdxS
• synonym:
• description^?: pyridoxal 5'-phosphate synthase lyase subunit PdxS

  descriptions from strain specific annotations:

  • pyridoxal 5'-phosphate synthase lyase subunit PdxS
  • pyridoxine biosynthesis protein
  • putative pyridoxine biosynthesis protein
  • pyridoxal 5'-phosphate synthase subunit PdxS
  • pyridoxal biosynthesis lyase PdxS
  • pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
  • Pyridoxal biosynthesis lyase
  • Pyridoxal 5'-phosphate synthase, synthase subunit PdxS
  • Pyridoxine biosynthesis enzyme
  • Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit
• strand^?: -
• coordinates^?: 3622925..3623800
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS07215 (pdxS)
(2)
D39:
SPD_RS06925 (pdxS)
(2)
D39V:
SPV_RS06920 (pdxS)
(19A)
Hungary19A-6:
SPH_RS07675 (pdxS)
(19F)
EF3030:
EF3030_RS06900 (pdxS)
(6B)^?
670-6B:
SP670_RS04100 (pdxS)
(6A)
6A-10:
HKM25_RS06835 (pdxS)
(5)
70585:
SP70585_RS07465 (pdxS)
(19F)
A026:
T308_RS03755 (pdxS)
(3)
A66:
A66_RS06520 (pdxS)
(11A)
AP200:
SPAP_RS07365 (pdxS)
(12F)
ASP0581:
EL334_RS07500 (pdxS)
(19F)
ATCC 49619:
EL263_RS07095 (pdxS)
(23F)
ATCC 700669:
SPN23F_RS07230 (pdxS)
(19F)
BM6001:
ODS73_RS07510 (pdxS)
(1)
BVJ1JL:
JN057_RS07130 (pdxS)
(14)
CGSP14:
SPCG_RS07540 (pdxS)
(19F)
G54:
SPG_RS06960 (pdxS)
(1)
gamPNI0373:
HMPREF1038_RS07110 (pdxS)
(3)
HU-OH:
EL271_RS07210 (pdxS)
(19A)
Hu15:
SPNHU15_RS07115 (pdxS)
(19A)
Hu17:
SPNHU17_RS07040 (pdxS)
(1)
INV104:
INV104_RS07165 (pdxS)
(14)
INV200:
SPNINV200_RS06995 (pdxS)
(14)
JJA:
SPJ_RS06780 (pdxS)
(19F)
MDRSPN001:
MDRSPN_RS03350 (pdxS)
(1)
NCTC7465:
AT689_RS06730 (pdxS)
(2)
NCTC7466:
DQM66_RS06920 (pdxS)
(4)
NU83127:
EL277_RS07290 (pdxS)
(3)
OXC141:
SPNOXC_RS06950 (pdxS)
(1)
P1031:
SPP_RS07325 (pdxS)
(2)
R6:
SPR_RS06600 (pdxS)
(19A)
SP49:
BMJ42_RS07545 (pdxS)
(1)
SPN032672:
SPN032672_RS02050 (pdxS)
(3)
SPN034156:
SPN034156_RS02020 (pdxS)
(3)
SPN034183:
SPN034183_RS06970 (pdxS)
(3)
SPN994038:
SPN994038_RS06875 (pdxS)
(3)
SPN994039:
SPN994039_RS06875 (pdxS)
(3)
SPNA45:
SPNA45_RS04260 (pdxS)
(19F)
ST556:
MYY_RS04230 (pdxS)
(19F)
Taiwan19F-14:
SPT_RS04015 (pdxS)
(19A)
TCH8431/19A:
HMPREF0837_RS05180 (pdxS)
(4)
Xen35:
CXP32_RS07305 (pdxS)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MTENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRM
  D39             MTENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRM
  D39V            MTENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRM
  Hungary19A-6    MTENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRM
  EF3030          MTENRYELNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAAGGVSRM
                  ************************************************************
  
  TIGR4           SDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEF
  D39             SDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEF
  D39V            SDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEF
  Hungary19A-6    SDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEF
  EF3030          SDPKMIKEIQEAVSIPVMAKVRIGHFVEAQILEAIEIDYIDESEVLSPADDRFHVDKKEF
                  ************************************************************
  
  TIGR4           QVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDE
  D39             QVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDE
  D39V            QVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDE
  Hungary19A-6    QVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDE
  EF3030          QVPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDIVQAVRHMRMMNQEIRRIQNLREDE
                  ************************************************************
  
  TIGR4           LYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
  D39             LYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
  D39V            LYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
  Hungary19A-6    LYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
  EF3030          LYVAAKDLQVPVELVQYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
                  ************************************************************
  
  TIGR4           GDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQILMAERGK
  D39             GDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQILMAERGK
  D39V            GDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQILMAERGK
  Hungary19A-6    GDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQILMAERGK
  EF3030          GDPVKRASAIVKAVTNFRNPQILAQISEDLGEAMVGINENEIQILMAERGK
                  ***************************************************