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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002990000
- symbol?: oxlT
- synonym:
- description?: L-lactate MFS transporter
- L-lactate MFS transporter
- Major facilitator:Oxalate:Formate Antiporter
- oxalate:formate antiporter
- major Facilitator Superfamily protein
- MFS transporter
- OFA family MFS transporter
- putative MFS-type transporter YhjX
- major facilitator superfamily protein (pseudogene)
- major facilitator%3B oxalate:formate antiporter
- major facilitator; oxalate:formate antiporter
- Major facilitator oxalate:formate antiporter
- Permeases of the major facilitator superfamily
- transporter, major facilitator family protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3894498..3897563
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKSNRYIIAFAGVILHLMLGSTYAWSVYRNPIIEKTGWDQASVAFAFSLAIFCLGLSAAF
D39 MKSNRYIIAFAGVILHLMLGSTYAWSVYRNPIIEKTGWDQASVAFAFSLAIFCLGLSAAF
D39V MKSNRYIIAFAGVILHLMLGSTYAWSVYRNPIIEKTGWDQASVAFAFSLAIFCLGLSAAF
Hungary19A-6 MKSNRYIIAFAGVILHLMLGSTYAWSVYRNPIIEKTGWDQASVAFAFSLAIFCLGLSAAF
EF3030 MKSNRYIIAFAGVILHLMLGSTYAWSVYRNPIIEKTGWDQASVAFAFSLAIFCLGLSAAF
************************************************************
TIGR4 MGRLVEKFGPKVMGSLSAFLYAGGNILTGFAIDRQELWLLYLAYGILGGLGLGAGYITPV
D39 MGRLVEKFGPKVMGSLSAFLYAGGNILTGFAIDRQELWLLYLAYGILGGLGLGAGYITPV
D39V MGRLVEKFGPKVMGSLSAFLYAGGNILTGFAIDRQELWLLYLAYGILGGLGLGAGYITPV
Hungary19A-6 MGRLVEKFGPRVMGSLSAFLYAGGNILTGFAIDRQELWLLYLAYGILGGLGLGSGYITPV
EF3030 MGRLVEKFGPRVMGSLSAFLYAGGNILTGFAIDRQELWLLYLAYGILGGLGLGAGYITPV
**********:******************************************:******
TIGR4 STIIKWFPDKRGLATGLAIMGFGFASLLTSPIAQHLIAGVGLVETFYILGASYFIIMLLA
D39 STIIKWFPDKRGLATGLAIMGFGFASLLTSPIAQHLIAGVGLVETFYILGASYFIIMLLA
D39V STIIKWFPDKRGLATGLAIMGFGFASLLTSPIAQHLIAGVGLVETFYILGASYFIIMLLA
Hungary19A-6 STIIKWFPDKRGLATGLAIMGFGFASLLTSPIAQHLIAGVGLVETFYILGASYFIIMLLA
EF3030 STIIKWFPDKRGLATGLAIMGFGFASLLTSPIAQHLIAGVGLVETFYILGASYFIIMLLA
************************************************************
TIGR4 SQFIKRPNEQELAILSSSGKEKTASLTQGMAANQALKSNRFYMLWIIFFINIACGLGLIS
D39 SQFIKRPNEQELAILSSSGKEKTASLTQGMAANQALKSNRFYILWIIFFINIACGLGLIS
D39V SQFIKRPNEQELAILSSSGKEKTASLTQGMAANQALKSNRFYILWIIFFINIACGLGLIS
Hungary19A-6 SQFIKRPNEQELAILSASGKEKTDSLTQGMTANQALKSNRFYILWIIFFINIACGLGLIS
EF3030 SQFIKRPNEQELAILSASGKEKTDSLTQGMTANQALKSNRFYILWIIFFINIACGLGLIS
****************:****** ******:***********:*****************
TIGR4 AASPMAQEMAGLSTSHAAVMVGVLGIFNGFGRLLWASLSDYIGRPLTFSILLLVNLFFSL
D39 AASPMAQEMAGLSTSHAAVMVGVLGIFNGFGRLLWASLSDYIGRPLTFSILLLVNLFFSL
D39V AASPMAQEMAGLSTSHAAVMVGVLGIFNGFGRLLWASLSDYIGRPLTFSILLLVNLFFSL
Hungary19A-6 AASPMAQEMAGLSTSHAAVMVGVLGIFNGFGRLLWASLSDYIGRPLTFSILLLVNLFFSL
EF3030 AASPMAQEMAGLSTSHAAVMVGVLGIFNGFGRLLWASLSDYIGRPLTFSILLLVNLFFSL
************************************************************
TIGR4 SLWLFTDSVLFVVAMSILMTCYGAGFSLIPAYLSDIFGTKELAALHGYILTAWAMAGLAG
D39 SLWLFTDSVLFVVAMSILMTCYGAGFSLIPAYLSDIFGTKELAALHGYILTAWAMAGLAG
D39V SLWLFTDSVLFVVAMSILMTCYGAGFSLIPAYLSDIFGTKELAALHGYILTAWAMAGLAG
Hungary19A-6 SLWLFTDSVLFVVAMSILMTCYGAGFSLIPAYLSDIFGTKELAALHGYILTAWAMAGLAG
EF3030 SLWLFTDSVLFVVAMSILMTCYGAGFSLIPAYLSDIFGTKELAALHGYILTAWAMAGLAG
************************************************************
TIGR4 PILLAETYKMAHSYTQTLFVFLILYSIALALSYYLGRSIKKESQKALT
D39 PILLAETYKMAHSYTQTLFVFLILYSIALALSYYLGRSIKKESQKPLT
D39V PILLAETYKMAHSYTQTLFVFLILYSIALALSYYLGRSIKKESQKPLT
Hungary19A-6 PILLAETYKMAHSYTQTLFVFLILYSIALALSYYLGRSIKKESQKPLT
EF3030 PILLAETYKMAHSYTQTLFVFLILYSIALALSYYLGRSIKKESQKPLT
*********************************************.**