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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003012000
- symbol?: hcnC
- synonym:
- description?: NAD(P)/FAD-dependent oxidoreductase
- NAD(P)/FAD-dependent oxidoreductase
- FAD-dependent oxidoreductase
- oxidoreductase, DadA family protein
- FAD-binding oxidoreductase
- Hydrogen cyanide synthase subunit HcnC
- Glycine/D-amino acid oxidases family
- Conserved hypothetical protein
- Glycine/D-amino acid oxidases (deaminating)
- Glycine oxidase
- oxidoreductase%2C DadA family protein
- pyridine nucleotide-disulfide oxidoreductase family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3916156..3917259
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKVAIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYK
D39 MKKVVIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYK
D39V MKKVVIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYK
Hungary19A-6 MKKVAIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYK
EF3030 MKKVAIIGAGIVGATAAYYLSRESDLEVTVFDHEQGQATKAAAGIISPWFSKRRNKAWYK
****.*******************************************************
TIGR4 MARLGADFYVDLLADLEKSGQEIDFYQRSGVFLLKKDESNLEELYQLALQRREESPLIGQ
D39 MARLGADFYVDLLADLEKSGQKIDFYQRSGVFLLKKDESKLEELYQLALQRREESPLIGQ
D39V MARLGADFYVDLLADLEKSGQKIDFYQRSGVFLLKKDESKLEELYQLALQRREESPLIGQ
Hungary19A-6 MARLGADFYVDLLADLEKSGQEIDFYQRSGVFLLKKDESKLEELYQLALQRREESPLIGQ
EF3030 MARLGADFYVDLLADLEKSGQEIDFYQRSGVFLLKKDESNLEELYQLALQRREESPLIGQ
*********************:*****************:********************
TIGR4 LAILNQASANELFPGLQGFDRLLYASGGARVDGQLLVTRLLEVSHVKLVKEKVTLTPLAS
D39 LAILDQASANELFPGLQGFDRLLYASGGARVDGQLLVTRLLEASHVKLVKEKVTLTLLSS
D39V LAILDQASANELFPGLQGFDRLLYASGGARVDGQLLVTRLLEASHVKLVKEKVTLTLLSS
Hungary19A-6 LAILNQASANELFPGLQGFDRLLYASGGARVDGQLLVTRLLEVSHVKLVKEKVTLTPLAS
EF3030 LAILNQASANELFPGLQGFDRLLYASGGARVDGQLLVTRLLEASHVKLVKEKVTLTPLAS
****:*************************************.************* *:*
TIGR4 GYQIGEEEFEQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQDMEDYPVVMPEGE
D39 GYQIGEEVFDQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQDMEDYPVVMPEGE
D39V GYQIGEEVFDQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQDMEDYPVVMPEGE
Hungary19A-6 GYQIGEEEFEQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLAQDMEAYPVVMPEGE
EF3030 GYQIGEEEFEQVILATGAWLGDMLEPLGYEVDVRPQKGQLRDYQLVQDMEAYPVVMPEGE
******* *:***********************************.**** *********
TIGR4 WDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIRA
D39 WDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIRA
D39V WDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIRA
Hungary19A-6 WDLIPFAGGKLSLGATHENDMGFDLTVDEPLLQQMEEAALPHYPVLARATSRAERVGIRA
EF3030 WDLIPFAGGKLSLGATHENDMGFDLTVDETLLQQMEEATLTHYLILAEATSKSERVGIRA
*****************************.********:*.** :**.***::*******
TIGR4 YTSDFSPFFGQVPDLTGVYAASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPLNYPIENY
D39 YTSDFSPFFGQVPGLTGVYAASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPENYPIENY
D39V YTSDFSPFFGQVPGLTGVYAASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPENYPIENY
Hungary19A-6 YTSDFSPFFGQVPELAGVYAASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPLNYPIENY
EF3030 YTSDFSPFFGQVPDLTGVYAASGLGSSGLTTGPIIGYHLAQLIQDKELTLDPENYPIENY
************* *:************************************ *******
TIGR4 VKRVKSE
D39 VKRVKSE
D39V VKRVKSE
Hungary19A-6 VKRVKSE
EF3030 VKRVKSE
*******