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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003102000
- symbol?: iolX_2
- synonym:
- description?: Gfo/Idh/MocA family protein
- Gfo/Idh/MocA family protein
- putative oxidoreductase
- putative oxidoreductase YjhC
- Gfo/Idh/MocA family oxidoreductase
- oxidoreductase
- oxidoreductase, Gfo/Idh/MocA family
- scyllo-inositol 2-dehydrogenase (NAD(+))
- Conserved hypothetical protein
- hypothetical oxidoreductase YjhC
- oxidoreductase, NAD-binding domain protein
- oxidoreductase family, C-terminal alpha/beta domain protein
- Predicted dehydrogenases-like protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4013726..4014786
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MVKYGVVGTGYFGAELARYMQKNDGAEITLLYDPDNAEAIAEELGAKVASSLDELVSSDE
D39 MVKYGVVGAGYFGAELARYMQKNDGAEITLLYDPDNAEAIAEELGAKVASSLDELVSSDE
D39V MVKYGVVGAGYFGAELARYMQKNDGAEITLLYDPDNAEAIAEELGAKVASSLDELVSSDE
Hungary19A-6 MVKYGVVGTGYFGSELARYMQKNDGAEITLLYDPDNAEAIAEELGAKVVSSLDELVSSDE
EF3030 MVKYGVVGAGYFGAELARYMQKNDGAEITLLYDPDNAEAIAEELGAKVASSLDELVSSDE
********:****:**********************************.***********
TIGR4 VDCVIVATPNNLHKEPVIKAAQHGKNVFCEKPIALSYQDCREMVDACKENNVTFMAGHIM
D39 VDCVIVATPNNLHKEPVIKAAQHGKNVFCEKPIALSYQDCREMVDACKENNVTFMAGHIM
D39V VDCVIVATPNNLHKEPVIKAAQHGKNVFCEKPIALSYQDCREMVDACKENNVTFMAGHIM
Hungary19A-6 VDCVIVATPNNLHKEPVIKAAQHGKNVFCEKPIALSYQDCREMVDACKENNVTFMAGHIM
EF3030 VDCVIVATPNNLHKEPVIKAAQHGKNVFCEKPIALSYQDCREMVDACKENNVTFMAGHIM
************************************************************
TIGR4 NFFNGVHHAKELINQGVIGDVLYCHTARNGWEEQQPSVSWKKIREKSGGHLYHHIHELDC
D39 NFFNGVHHAKELINQGVIGDVLYCHTARNGWEEQQPSVSWKKIREKSGGHLYHHIHELDC
D39V NFFNGVHHAKELINQGVIGDVLYCHTARNGWEEQQPSVSWKKIREKSGGHLYHHIHELDC
Hungary19A-6 NFFNGVHHAKELINQGVIGDVLYCHTARNGWEEQQPSVSWKKIREKSGGHLYHHIHELDC
EF3030 NFFNGVHHAKELINQGVIGDVLYCHTARNGWEEQQPSVSWKKIREKSGGHLYHHIHELDC
************************************************************
TIGR4 VQFLMGGMPETVTMTGGNVAHEGEHFGDEDDMIFVNMEFSNKRFALLEWGSAYRWGEHYV
D39 VQFLMGGMPETVTMTGGNVAHEGEHFGDEDDMIFVNMEFSNKRFALLEWGSAYRWGEHYV
D39V VQFLMGGMPETVTMTGGNVAHEGEHFGDEDDMIFVNMEFSNKRFALLEWGSAYRWGEHYV
Hungary19A-6 VQFLMGGMPETVTMTGGNVAHEGEHFGDEDDMIFVNMEFSNKRFALLEWGSAYRWGEHYV
EF3030 VQFLMGGMPETVTMTGGNVAHEGEHFGDEDDMIFVNMEFSNKRFALLEWGSAYRWGEHYV
************************************************************
TIGR4 LIQGSKGAIRLDLFNCKGTLKLDGQESYFLIHESQEEDDDRTRIYHSTEMDGAIAYGKPG
D39 LIQGSKGAIRLDLFNCKGTLKLDGQESYFLIHESQEEDDDRTRIYHSTEMDGAIAYGKPG
D39V LIQGSKGAIRLDLFNCKGTLKLDGQESYFLIHESQEEDDDRTRIYHSTEMDGAIAYGKPG
Hungary19A-6 LIQGTKGAIRLDLFNCKGTLKLDGQESYFLIHESQEEDDDRTRIYHSTEMDGAIAYGKPG
EF3030 LIQGSKGAIRLDLFNCKGTLKLDGQESYFLIHESQEEDDDRTRIYHSTEMDGAIAYGKPG
****:*******************************************************
TIGR4 KRTPLWLSSVIDKEMRYLHEIMEGAPVSEEFAKLLTGEAALEAIATADACTQSMFEDRKV
D39 KRTPLWLSSVIDKEMRYLHEIMQGAPVSEEFAKLLTGEAALEAIATADACTQSMFEDRKV
D39V KRTPLWLSSVIDKEMRYLHEIMQGAPVSEEFAKLLTGEAALEAIATADACTQSMFEDRKV
Hungary19A-6 KRTPLWLSSVIDKEMRYLHEIMQGAPVSEEFAKLLTGEAALEAIATADACTQSMFEDRKV
EF3030 KRTPLWLSSVIDKEMRYLHEIMEGAPVSEEFAKLLTGEAALEAIATADACTQSMFEDRKV
**********************:*************************************
TIGR4 KLSEIVK
D39 KLSEIVK
D39V KLSEIVK
Hungary19A-6 KLSEIVN
EF3030 KLSEIVK
******: