PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003103000
• symbol^?: nanB
• synonym:
• description^?: neuraminidase NanB

  descriptions from strain specific annotations:

  • neuraminidase NanB
  • Sialidase B precursor (neuraminidase B)
  • Sialidase B
  • sialidase B (Neuraminidase B)
  • sialidase
  • neuraminidase B
  • BNR/Asp-box repeat protein
  • sialidase B precursor
  • pseudogene
• strand^?: -
• coordinates^?: 4014846..4015915
• occurrence^?: in 93% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS08335 (nanB)
(2)
D39:
SPD_RS07965 (nanB)
(2)
D39V:
SPV_RS07960 (nanB)
(19A)
Hungary19A-6:
—
(19F)
EF3030:
EF3030_RS07950 (nanB)
(6B)^?
670-6B:
SP670_RS08795 (nanB)
(6A)
6A-10:
HKM25_RS08420 (nanB)
(5)
70585:
SP70585_RS08565 (nanB)
(19F)
A026:
T308_RS07865 (nanB)
(3)
A66:
A66_RS07520 (nanB)
(11A)
AP200:
SPAP_RS08370 (nanB)
(12F)
ASP0581:
—
(19F)
ATCC 49619:
EL263_RS08155 (nanB)
(23F)
ATCC 700669:
SPN23F_RS08510 (nanB)
(19F)
BM6001:
—
(1)
BVJ1JL:
JN057_RS08135 (nanB)
(14)
CGSP14:
SPCG_RS08590 (nanB)
(19F)
G54:
SPG_RS07960 (nanB)
(1)
gamPNI0373:
HMPREF1038_RS08180 (nanB)
(3)
HU-OH:
EL271_RS08265 (nanB)
(19A)
Hu15:
SPNHU15_RS00700 (nanB)
(19A)
Hu17:
SPNHU17_RS08005 (nanB)
(1)
INV104:
INV104_RS08265 (nanB)
(14)
INV200:
SPNINV200_RS08045 (nanB)
(14)
JJA:
SPJ_RS07850 (nanB)
(19F)
MDRSPN001:
MDRSPN_RS02705 (nanB)
(1)
NCTC7465:
AT689_RS05725 (nanB)
(2)
NCTC7466:
DQM66_RS07960 (nanB)
(4)
NU83127:
EL277_RS08405 (nanB)
(3)
OXC141:
SPNOXC_RS08030 (nanB)
(1)
P1031:
SPP_RS08400 (nanB)
(2)
R6:
SPR_RS07590 (nanB)
(19A)
SP49:
BMJ42_RS08930 (nanB)
(1)
SPN032672:
SPN032672_RS03155 (nanB)
(3)
SPN034156:
SPN034156_RS03095 (nanB)
(3)
SPN034183:
SPN034183_RS08055 (nanB)
(3)
SPN994038:
SPN994038_RS07955 (nanB)
(3)
SPN994039:
SPN994039_RS07960 (nanB)
(3)
SPNA45:
SPNA45_RS03210 (nanB)
(19F)
ST556:
MYY_RS08295 (nanB)
(19F)
Taiwan19F-14:
SPT_RS08085 (nanB)
(19A)
TCH8431/19A:
HMPREF0837_RS09235 (nanB)
(4)
Xen35:
CXP32_RS08415 (nanB)

⊟Genome Viewer

TIGR4
D39
D39V
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MNKRGLYSKLGISVVGISLLMGVPTLIHANELNYGQLSISPIFQGGSYQLNNKSIDISSL
  D39             MNKRGLYSKLGISVVGISLLMGVPALIHANELNYGQLSISPIFQGGSYQLNNKSIDISPL
  D39V            MNKRGLYSKLGISVVGISLLMGVPALIHANELNYGQLSISPIFQGGSYQLNNKSIDISPL
  EF3030          MNKRGLYSKLGISVVGISLLMGVPTLIHANELNYGQLSISPIFQGGSYQLNNKSIDISSL
                  ************************:*********************************.*
  
  TIGR4           LLDKLSGESQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQ
  D39             LLDKLSGDSQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQ
  D39V            LLDKLSGDSQTVVMKFKADKPNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQ
  EF3030          LLDKLSGESQTVVMKFKADEPNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQ
                  *******:***********:****************************************
  
  TIGR4           KGINYLFSRPASLWGKHKGQAVENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNI
  D39             KGINYLFSRPASLWGKHKGQAVENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNI
  D39V            KGINYLFSRPASLWGKHKGQAVENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNI
  EF3030          KGINYLFSRPASLWGKHKGQAVENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNI
                  ************************************************************
  
  TIGR4           NGIDKATLGAVNREGKEHYLAKGSIDEISLFNKAISDQEVSTIPLSNPFQLIFQSGDSTQ
  D39             NGIDKATLGAVNREGKEHYLAKGSIDEISLFNKAISDQEVSTIPLSNPFQLIFQSGDSTQ
  D39V            NGIDKATLGAVNREGKEHYLAKGSIDEISLFNKAISDQEVSTIPLSNPFQLIFQSGDSTQ
  EF3030          NGIDKATLGAVNREGKEHYLAKGSIDEISLFNKAISDQEVSNIPLSNPFQLIFQSGDSTQ
                  *****************************************.******************
  
  TIGR4           ANYFRIPTLYTLSSGRVLSSIDARYGGTHDSKSKINIATSYSDDNGKTWSEPIFAMKFND
  D39             ANYFRIPTLYTLSSGRVLSSIDARYGGTHDSKSKINIATSYSDDNGKTWSEPIFAMKFND
  D39V            ANYFRIPTLYTLSSGRVLSSIDARYGGTHDSKSKINIATSYSDDNGKTWSEPIFAMKFND
  EF3030          ANYFRIPTLYTLSSGRVLSSIDARYGGTHDSKSKINIATSYSDDNGKTWSEPIFAMKFND
                  ************************************************************
  
  TIGR4           YEEQLVYWPRDNKLKNSQISGSASFIDSSIVEDKKSGKTILLADVMPAGIGNNNANKADS
  D39             YEEQLVYWPRDNKLKNSQISGSASFIDSSIVEDKKSGKTILLADVMPAGIGNNNANKADS
  D39V            YEEQLVYWPRDNKLKNSQISGSASFIDSSIVEDKKSGKTILLADVMPAGIGNNNANKADS
  EF3030          YEEQLVYWPRDNKLKNSQISGSASFIDSSIVEDKKSGKTILLADVMPAGIGNNNANKADS
                  ************************************************************
  
  TIGR4           GFKEINGHYYLKLKKNGDNDFRYTVRENGVVYNETTNKPTNYTINDKYEVLEGGKSLTVE
  D39             GFKEINGHYYLKLKKNGDNDFRYTVRENGVVYDETTNKPTNYTINDKYEVLEGGKSLTVE
  D39V            GFKEINGHYYLKLKKNGDNDFRYTVRENGVVYDETTNKPTNYTINDKYEVLEGGKSLTVE
  EF3030          GFKEINGHYYLKLKKNGDNDFRYTVRENGVVYDETTNKPTNYTINDKYEVLEGGKSLTVE
                  ********************************:***************************
  
  TIGR4           QYSVDFDSGSLRERHNGKQVPMNVFYKDSLFKVTPTNYIAMTTSQNRGESWEQFKLLPPF
  D39             QYSVDFDSGSLRERHNGKQVPMNVFYKDSLFKVTPTNYIAMTTSQNRGESWEQFKLLPPF
  D39V            QYSVDFDSGSLRERHNGKQVPMNVFYKDSLFKVTPTNYIAMTTSQNRGESWEQFKLLPPF
  EF3030          QYSVDFDSGSLREKHNGKQVPMNVFYKDSLFKVTPTNYIAMTTSQNRGESWEQFKLLPPF
                  *************:**********************************************
  
  TIGR4           LGEKHNGTYLCPGQGLALKSSNRLIFATYTSGELTYLISDDSGQTWKKSSASIPFKNATA
  D39             LGEKHNGTYLCPGQGLALKSSNRLIFATYTSGELTYLISDDSGQTWKKSSASIPFENATA
  D39V            LGEKHNGTYLCPGQGLALKSSNRLIFATYTSGELTYLISDDSGQTWKKSSASIPFENATA
  EF3030          LGEKHNGTYLCPGQGLALKSSNRLIFATYTSGELTYLISDDSGQTWKKSSASIPFKNATA
                  *******************************************************:****
  
  TIGR4           EAQMVELRDGVIRTFFRTTTGKIAYMTSRDSGETWSKVSYIDGIQQTSYGTQVSAIKYSQ
  D39             EAQMVELRDGVIRTFFRTTTGKIAYMTSRDSGETWSEVSYIDGIQQTSYGTQVSAIKYSQ
  D39V            EAQMVELRDGVIRTFFRTTTGKIAYMTSRDSGETWSEVSYIDGIQQTSYGTQVSAIKYSQ
  EF3030          EAQMVELRDGVIRTFFRTTTGKIAYMTSRDSGETWSKVSYIDGIQQTSYGTQVSAIKYSQ
                  ************************************:***********************
  
  TIGR4           LIDGKEAVILSTPNSRSGRKGGQLVVGLVNKEDDSIDWKYHYDIDLPSYGYAYSAITELP
  D39             LIDGKEAVILSTPNSRSGRKGGQLVVGLVNKEDDSIDWKYHYDIDLPSYGYAYSAITELP
  D39V            LIDGKEAVILSTPNSRSGRKGGQLVVGLVNKEDDSIDWKYHYDIDLPSYGYAYSAITELP
  EF3030          LIDGKEAVILSTPNSRSGRKGGQLVVGLVNKEDDSIDWKYHYDIDLPSYGYAYSAITELP
                  ************************************************************
  
  TIGR4           NHHIGVLFEKYDSWSRNELHLSNVVQYIDLEINDLTK
  D39             NHHIGVLFEKYDSWSRNELHLSNVVQYIDLEINDLTK
  D39V            NHHIGVLFEKYDSWSRNELHLSNVVQYIDLEINDLTK
  EF3030          NHHIGVLFEKYDSWSRNELHLSNVVQYIDLEINDLTK
                  *************************************