Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003115000
- symbol?: axe1
- synonym:
- description?: acetylxylan esterase
- acetylxylan esterase
- Xylan esterase 1
- acetyl xylan esterase (AXE1) family protein
- Cephalosporin-C deacetylase
- acetyl xylan esterase, putative
- putative acetyl xylan esterase
- Acetyl esterase (deacetylase)
- acetyl xylan esterase (AXE1)
- Acetyl xylan esterase 1; Cephalosporin-C deacetylase
- Bifunctional acetyl xylan esterase 1/cephalosporin-C deacetylase
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4035862..4036843
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKNPALLEEIKTYRGRDEVPEDFDDFWDGEVKNVSTLPSYHLEERDFHIPQVKCYELTFE
D39 MKNPALLEEIKTYRGRDEVPEDFDAFWDGEVKNVSTLPSYHLEERDFHIPQVKCYELTFE
D39V MKNPALLEEIKTYRGRDEVPEDFDAFWDGEVKNVSTLPSYHLEERDFHIPQVKCYELTFE
Hungary19A-6 MKNPALLEEIKTYRGRDEVPEDFDDFWDGEVKNVSTLPSYHLEERDFHIPQVKCYELTFE
EF3030 MKNPALLEEIKTYRGRDEVPEDFDAFWDGEVKNVSTLPSYHLEERDFRIPQVKCYELTFE
************************ **********************:************
TIGR4 GSKEGKVYARIVLPKSEEKVPLIFHFHGYMGRGWDWADMLGFTVAGYGVVSMDVRGQSGY
D39 GSKEGKVYARIVLPKSEEKVPLIFHFHGYMGRGWDWADMLGFTVAGYGVVSMDVRGQSGY
D39V GSKEGKVYARIVLPKSEEKVPLIFHFHGYMGRGWDWADMLGFTVAGYGVVSMDVRGQSGY
Hungary19A-6 GSKEGKVYARIVLPKSEEKVPLIFHFHGYMGRGWDWADMLGFTVAGYGVVSMDVRGQSGY
EF3030 GSKEGKVYARIVLPKSEEKVPLIFHFHGYMGRGWDWADMLGFTVAGYGVVSMDVRGQSGY
************************************************************
TIGR4 SQDGLRSPLGNTVKGHIIRGAVEGRDHLFYKDVYLDIYQLVEIVASLSQVDEKRLSSYGA
D39 SQDGLRSPLGNTVKGHIIRGAVEGRDHLFYKDVYLDIYQLVEIVASLSQVDEKRLSSYGA
D39V SQDGLRSPLGNTVKGHIIRGAVEGRDHLFYKDVYLDIYQLVEIVASLSQVDEKRLSSYGA
Hungary19A-6 SQDGLRSPLGNTVKGHIIRGAMEGRDHLFYKDVYLDIYQLVEIVASLSQVDEKRLSSYGA
EF3030 SQDGLRSPLGNTVKGHIIRGAVEGRDHLFYKDVYLDIYQLVEIVASLSQVDEKRLSSYGA
*********************:**************************************
TIGR4 SQGGALALVAAALNPRIQKTVAIYPFLSDFRRVIEIGNTSEAYDELFRYFKFHDPFHETE
D39 SQGGALALVAAALNPRIQKTVAIYPFLSDFRRVIEIGNTSEAYDELFRYFKFYDPFHETE
D39V SQGGALALVAAALNPRIQKTVAIYPFLSDFRRVIEIGNTSEAYDELFRYFKFYDPFHETE
Hungary19A-6 SQGGALALVAAALNPRIQKTVAIYPFLSDFRRVIEIGNTSEAYDELFRYFKFHDPFHETE
EF3030 SQGGALALVAAALNPRIQKTVAVYPFLSDFRRVIEIGNTSEAYDELFRYFKFHDPFHETE
**********************:*****************************:*******
TIGR4 EEIMATLAYIDVKNLAHRIQGEVKMITGLDDDVCYPITQFAIYNRLTCDKTYRIMPEYAH
D39 EEIMATLAYIDVKNLAHRIQGEVKMITGLDDDVCYPITQFAIYNRLTCDKTYRIMPEYAH
D39V EEIMATLAYIDVKNLAHRIQGEVKMITGLDDDVCYPITQFAIYNRLTCDKTYRIMPEYAH
Hungary19A-6 EEIMATLAYIDVKNLAHRIQGEVKMITGLDDDVCYPITQFAIYNRLTCDKTYRIMPEYAH
EF3030 EEIMATLAYIDVKNLAHRIQGEVKMITGLDDDVCYPITQFAIYNRLTCDKTYRIMPEYAH
************************************************************
TIGR4 EAMNVFVNDQVYNWLCGSEIPFKYLK
D39 EAMNVFVNDQVYNWLCGSEIPFKYLK
D39V EAMNVFVNDQVYNWLCGSEIPFKYLK
Hungary19A-6 EAMNVFVNDQVYNWLCGSEIPFKYLK
EF3030 EAMNVFVNDQVYNWLCGSEIPFKYLK
**************************