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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003116000
- symbol?: dnaB
- synonym:
- description?: replication initiation and membrane attachment family protein
- replication initiation and membrane attachment family protein
- replication initiation and membrane attachment protein
- DNA helicase
- chromosome replication initiation protein/membrane attachment protein
- Helicase loader DnaB
- replicative DNA helicase
- Chromosome replication initiation protein/membrane attachment protein, Putative
- putative replication initiation and membrane attachment protein
- Replication initiation/membrane attachment protein
- replication initiation and membrane attachment protein, DnaB/DnaD family
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3946096..3947267
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKPIDRFSYLKNNRVSQDTSSLVQCYLPIIGQEALSLYLYTISFWDNGRKEYLFSSILNH
D39 MKPIDRFSYLKNNRVSQDTSSLVQCYLPIIGQEALSLYLYTISFWDNGRKEYLFSSILNH
D39V MKPIDRFSYLKNNRVSQDTSSLVQCYLPIIGQEALSLYLYTISFWDNGRKEYLFSSILNH
Hungary19A-6 MKPIDRFSYLKNNRVSQDTSSLVQCYLPIIGQEALSLYLYTISFWDNGRKEYLFSSILNH
EF3030 MKPIDRFSYLKNNRVSQDTSSLVQCYLPIIGQEALSLYLYTISFWDNGRKEYLFSSILNH
************************************************************
TIGR4 LNFGMDRLIKSLKILSAFNLLTLYQKGDVYQLALHAPLSSQDFLGHPVYRRLLEKKIGDV
D39 LNFGMDRLIKSLKILSAFNLLTLYQKGDVYQLALHAPLSSQDFLGHPVYRRLLEKKIGDS
D39V LNFGMDRLIKSLKILSAFNLLTLYQKGDVYQLALHAPLSSQDFLGHPVYRRLLEKKIGDS
Hungary19A-6 LNFGMDRLIKSLKILSAFNLLTLYQKGDVYQLALHAPLSSQDFLEHPVYRRLLEKKIGDS
EF3030 LNFGMDRLIKSLKILSAFNLLTLYQKGDVYQLALHAPLSSQDFLEHPVYRRLLEKKIGDS
******************************************** **************
TIGR4 AVEDLKVESADGEEIPVSLNQVFPELAELGSQEDLGLKKKVANDFDLEHFRQLMARDGLR
D39 AVEDLKVESADGEEIPVSLNQVFPELAELGSQEDLGLKKKVANDFDLEHFRQLMARDGLR
D39V AVEDLKVESADGEEIPVSLNQVFPELAELGSQEDLGLKKKVANDFDLEHFRQLMARDGLR
Hungary19A-6 AVEDLKVESADGEEIPVSLNQVFPELAELGSQEDLGLKKKVANDFDLDHFRQLMARDGLR
EF3030 AVEDLKVESADGEEIPVSLNQVFPELAELGSQEDLGLKKKVANDFDLEHFRQLMARDGLR
***********************************************:************
TIGR4 FADEQSDVLNLFAIAEEKKWTWFETYQLAKSTAVSQVISTKRMREKIAQKPVSSDFSLKE
D39 FADEQSDVLNLFAIAEEKKWTWFETYQLAKSTAVSQVISTKRMREKIAQKPVSSDFSLKE
D39V FADEQSDVLNLFAIAEEKKWTWFETYQLAKSTAVSQVISTKRMREKIAQKPVSSDFSLKE
Hungary19A-6 FADEQSDVLNLFAIAEEKKWTWFETYQLAKSTAVSQVISTKRMREKIAQKPVSSDFSPKE
EF3030 FADEQSDVLNLFAIAEEKKWTWFETYQLAKSTAVSQVISTKRMREKIAQKPVSSDFSLKE
********************************************************* **
TIGR4 ATIIKEAKSKTALQFLAEIKQTRKGTITQTERELLQQMAGLGLLDEVINIILLLTFNKVD
D39 TTIIKEAKSKTALQFLAEIKQTRKGTITQTERELLQQMAGLGLLDEVINIILLLTFNKVD
D39V TTIIKEAKSKTALQFLAEIKQTRKGTITQTERELLQQMAGLGLLDEVINIILLLTFNKVD
Hungary19A-6 TTIIKEAKSKTALQFLAEIKQTRKGTTTQTERELLQQMAGLGLLDEVINIILLLTFNKVD
EF3030 TTIIKEAKSKTALQFLAEIKQTRKGTTTQTERELLQQMAGLGLLDEVINIILLLTFNKVD
:************************* *********************************
TIGR4 SANINEKYAMKVANDYAYQKIHSAEEAVLRIRDRGQKAKTQKQNQTAPEKTNVPKWSNPE
D39 SANINEKYAMKVANDYAYQKIHSAEKAVLRIREREQKAKTQKQNQTAPAKTNIPKWSNPE
D39V SANINEKYAMKVANDYAYQKIHSAEKAVLRIREREQKAKTQKQNQTAPAKTNIPKWSNPE
Hungary19A-6 SANINEKYAMKVANDYAYQKIHSAEEAVLRIRERGQKAKTQKQNQTAPVKTNVPKWSNPE
EF3030 SANINEKYAMKVANDYAYQKIHSAEKAVLRIRERGQKAKTQKQNQTAPVKTNVPKWSNPE
*************************:******:* ************* ***:*******
TIGR4 YKNETSEETRLELERKKQELLARLEKGGD
D39 YKNTSSAEELEEMERQTLELLAKLDNGGD
D39V YKNTSSAEELEEMERQTLELLAKLDNGGD
Hungary19A-6 YKNETSEETRLELERKKQELLARLEKGGD
EF3030 YKNETSEETRLELERKKQELLARLEKGGD
*** :* * *:**:. ****:*::***