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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003172000
- symbol?: tmcAL
- synonym:
- description?: nucleotidyltransferase
- nucleotidyltransferase
- conserved hypothetical protein
- putative nucleotidyltransferase
- UPF0348 protein family
- HIGH Nucleotidyl Transferase family protein
- Predicted nucleotidyltransferase
- tRNA(Met) cytidine acetate ligase
- uncharacterized protein family UPF0348
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4099128..4100225
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MTITGIIAEFNPFHNGHKYLLDQAEGLKIVAMSGNFMQRGEPAIVDKWTRTQMALENGAD
D39 MTITGIIAEFNPFHNGHKYLLDQAEGLKIVAMSGNFMQRGEPAIVDKWTRAQMALENGAD
D39V MTITGIIAEFNPFHNGHKYLLDQAEGLKIVAMSGNFMQRGEPAIVDKWTRAQMALENGAD
Hungary19A-6 MTITGIIAEFNPFHNGHKYLLDQAEGLKIVAMSGNFMQRGEPAIVDKWTRAQMALENGAD
EF3030 MTITGIIAEFNPFHNGHKYLLDQAEGLKIVAMSGNFMQRGEPAIVDKWTRAQMALENGAD
**************************************************:*********
TIGR4 LVVELPFLVSVQAADFFGQGAMDILDRLGIDSLVFGTEEVRDYQKIADLYTEKGAEMEKF
D39 LVVELPFLVSVQAADFFGQGSVDILDRLGIDSLAFGTEEVLDYQKIADLYTEKGAEMEKF
D39V LVVELPFLVSVQAADFFGQGSVDILDRLGIDSLAFGTEEVLDYQKIADLYTEKGAEMEKF
Hungary19A-6 LVVELPFLVSVQAADFFGQGAVDILDRLGIDSLVFGTEEVRDYQKIADLYTEKGAEMEKF
EF3030 LVVELPFLVSVQAADFFGQGAVDILDRLGIDSLVFGTEEVLDYQKIADLYTEKGAEMEKF
********************::***********.****** *******************
TIGR4 VENLPDSLSYPQKTQAMWKEFAGLDFSGNTPNHVLALAYAKAVAGRNIKLHPIQRQGAGY
D39 VKNLPDSLSYPQKTQAMWKEFAGLDFSGNTPNHVLALAYAKAVAGRNIKLHPIQRQGAGY
D39V VKNLPDSLSYPQKTQAMWKEFAGLDFSGNTPNHVLALAYAKAVAGRNIKLHPIQRQGAGY
Hungary19A-6 VENLPDSLSYPQKTQAMWKEFAGLDFSGNTPNHVLALAYAKAVAGRNIKLHPIQRQGAGY
EF3030 VKNLPDSLSYPQKTQAMWKEFAGLDFSGNTPNHVLALAYAKAVAGRNIKLHPIQRQGAGY
*:**********************************************************
TIGR4 HSVNKDVDFASATALRQHQKDQDFLERFMPSVALFEQASKVIWEDYFPLLRYQILSNPDL
D39 HSVNKDVDFASATALRQHQKDQDFLERFMPSVALFEQASKVIWEDYFPLLRYQILSNPDL
D39V HSVNKDVDFASATALRQHQKDQDFLERFMPSVALFEQASKVIWEDYFPLLRYQILSNPDL
Hungary19A-6 HSVNKDVDFASATALRQHQKDQDFLERFMPSVALFEQASKVIWEDYFPLLRYQILSNPDL
EF3030 HSVNKDVDFASATALRQHQKDQDFLERFMPSVALFEQASKVIWEDYFPLLRYQILSNPDL
************************************************************
TIGR4 TTIYQVNQEMAVRIKEAIKTAQSVEELVELVTTKRYTKARVRRLLTYILMQARESDLPEA
D39 TTIYQVNQEMAVRIKEAIKTAQSVEELVELVTTKRYTKARVRRLLTYILMQARESDLPEA
D39V TTIYQVNQEMAVRIKEAIKTAQSVEELVELVTTKRYTKARVRRLLTYILMQARESDLPEA
Hungary19A-6 TTIYQVNQEMAVRIKEAIKTAQSVEELVELVTTKRYTKARVRRLLSYILVQARESNLPEA
EF3030 TTIYQVNQEMAVRIKEAIKTAQSVEELVELVTTKRYTKARVRRLLTYILMQARESDLPEA
*********************************************:***:*****:****
TIGR4 IHVLGFTEKGRQHLKSLKGQVSLVSRIGKEPWDAMTQKADQIYQLGKPSIAEQNFGRVPI
D39 IHVLGFTEKGRQHLKSLKGQVSLVSRIGKEPWDAMTQKVDQIYQLGKPSIAEQNFGRVPI
D39V IHVLGFTEKGRQHLKSLKGQVSLVSRIGKEPWDAMTQKVDQIYQLGKPSIAEQNFGRVPI
Hungary19A-6 IHVLGFTEKGRQHLKSLKGQVSLVSRIGKEPWDAMTQKADQIYQLGKPSIAEQNFGRVPI
EF3030 IHVLGFTEKGRQHLKSLKGQVSLVSRIGKEPWDAMTQKADQIYQLGKPSIAEQNFGRVPI
**************************************.*********************
TIGR4 RIETN
D39 RIETN
D39V RIETN
Hungary19A-6 RIETN
EF3030 RIETN
*****