PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

serotype 19A

serotype 19A

serotype 1

serotype 14

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary[edit | edit source]

pan ID^?: PNEUPAN003189000
symbol^?: secA-2
synonym: secA2
description^?: accessory Sec system translocase SecA2
- accessory Sec system translocase SecA2
- preprotein translocase subunit SecA
- preprotein translocase, SecA subunit
- preprotein translocase SecA subunit-like protein
- Preprotein translocase SecA2
- Protein translocase subunit SecA
- translocase
- pseudogene
strand^?: -
coordinates^?: 4116923..4119299
occurrence^?: in 40% of 43 strains

⊟Orthologs[edit | edit source]

TIGR4:

SP_RS08710 (secA2)

D39:

—

D39V:

—

Hungary19A-6:

SPH_RS09115 (secA2)

EF3030:

EF3030_RS08330 (secA2)

670-6B:

—

6A-10:

HKM25_RS08785 (secA2)

70585:

SP70585_RS08935 (secA2)

A026:

—

A66:

—

AP200:

—

ASP0581:

—

ATCC 49619:

—

ATCC 700669:

SPN23F_RS08910 (secA2)

BM6001:

—

BVJ1JL:

—

CGSP14:

SPCG_RS08965 (secA2)

G54:

—

gamPNI0373:

—

HU-OH:

—

Hu15:

SPNHU15_RS08365 (secA2)

Hu17:

SPNHU17_RS08360 (secA2)

INV104:

INV104_RS08625 (secA2)

INV200:

SPNINV200_RS08415 (secA2)

JJA:

SPJ_RS08225 (secA2)

MDRSPN001:

—

NCTC7465:

AT689_RS05370 (secA2)

NCTC7466:

—

NU83127:

EL277_RS08790 (secA2)

OXC141:

—

P1031:

—

R6:

—

SP49:

BMJ42_RS09325 (secA2)

SPN032672:

SPN032672_RS03515 (secA2)

SPN034156:

—

SPN034183:

—

SPN994038:

—

SPN994039:

—

SPNA45:

—

ST556:

—

Taiwan19F-14:

—

TCH8431/19A:

—

Xen35:

CXP32_RS08795 (secA2)

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.505)

TIGR4           MFRRLGQDFQLRKVKKILKQINALKGKMSSLSDQELVAKTVEFRQRLSEGESLDDILVEA
Hungary19A-6    MFRRLGQDFQLRKVKKILKQINALKGKMSSLSDQELVAKTVEFRQRLSEGESLDDILVEA
EF3030          MFRRLGQDFQLRKVKKILKQINALKGKMSSLSDQELVAKTVEFRQRLSEGESLDDILVEA
                ************************************************************

TIGR4           FAVVREADKRILGMFPYDVQVMGAIVMHYGNVAEMNTGEGKTLTATMPVYLNAFSGEGVM
Hungary19A-6    FAVVREADKRILGMFPYDVQVMGAIVMHYGNVAEMNTGEGKTLTATMPVYLNAFSGEGVM
EF3030          FAVVREADKRILGMFPYDVQVMGAIVMHYGNVAEMNTGEGKTLTATMPVYLNAFSGEGVM
                ************************************************************

TIGR4           VVTPNEYLSKRDAEEMGQVYRFLGLTIGVPFTEDPKKEMKAEEKKLIYASDIIYTTNSNL
Hungary19A-6    VVTPNEYLSKRDAEEMGQVYRFLGLTIGVPFTEDPKKEMKAEEKKLIYASDIIYTTNSNL
EF3030          VVTPNEYLSKRDAEEMGQVYRFLGLTIGVPFTEDPKKEMKAEEKKLIYASDIIYTTNSNL
                ************************************************************

TIGR4           GFDYLNDNLASNEEGKFLRPFNYVIIDEIDDILLDSAQTPLIIAGSPRVQSNYYAIIDTL
Hungary19A-6    GFDYLNDNLASNEEGKFLRPFNYVIIDEIDDILLDSAQTPLIIAGSPRVQSNYYAIINTL
EF3030          GFDYLNDNLASNEEGKFLRPFNYVIIDEIDDILLDSAQTPLIIAGSPRVQSNYYAIIDTL
                *********************************************************:**

TIGR4           VTTLVEGEDYIFKEEKEEVWLTTKGAKSAENFLGIDNLYKEEHASFARHLVYAIRAHKLF
Hungary19A-6    VTTLVEGEDYIFKEEKEEVWLTTKGAKSAENFLGIDNLYKEEHASFARHLVYAIRAHKLF
EF3030          VTTLVEGEDYIFKEEKEEVWLTTKGAKSAEDFLGIDNLYKEEHASFARHLVYAIRAHKLF
                ******************************:*****************************

TIGR4           TKDKDYIIRGNEMVLVDKGTGRLMEMTKLQGGLHQAIEAKEHVKLSPETRAMASITYQSL
Hungary19A-6    TKDKDYIIRGNEMVLVDKGTGRLMEMTKLQGGLHQAIEAKEHVKLSPETRAMASITYQSL
EF3030          TKDKDYIIRGNEMVLVDKGTGRLMEMTKLQGGLHQAIEAKEHVKLSPETRAMASITYQSL
                ************************************************************

TIGR4           FKMFNKISGMTGTGKVAEKEFIETYNMSVVRIPTNRPRQRIDYPDNLYITLPEKVYASLE
Hungary19A-6    FKMFNKISGMTGTGKVAEKEFIETYNMSVVRIPTNRPRQRIDYPDNLYITLPEKVYASLE
EF3030          FKMFNKISGMTGTGKVAEKEFIETYNMSVVRIPTNRPRQRIDYPDNLYITLPEKVYASLE
                ************************************************************

TIGR4           YIKQYHAKGNPLLVFVGSVEMSQLYSSLLFREGIAHNVLNANNAAREAQIISESGQMGAV
Hungary19A-6    YIKQYHAKGNPLLVFVGSVEMSQLYSSLLFREGIAHNVLNANNAAREAQIISESGQMGAV
EF3030          YIKQYHAKGNPLLVFVGSVEMSQLYSSLLFREGIAHNVLNANNAAREAQIISESGQMGAV
                ************************************************************

TIGR4           TVATSMAGRGTDIKLGKGVAELGGLIVIGTERMESQRIDLQIRGRSGRQGDPGMSKFFVS
Hungary19A-6    TVATSMAGRGTDIKLGKGVAELGGLIVIGTERMESQRIDLQIRGRSGRQGDPGMSKFFVS
EF3030          TVATSMAGRGTDIKLGKGVAELGGLIVIGTERMESQRIDLQIRGRSGRQGDPGMSKFFVS
                ************************************************************

TIGR4           LEDDVIKKFGPSWVHKKYKDYQVQDMTQPEVLKGRKYRKLVEKAQHASDSAGRSARRQTL
Hungary19A-6    LEDDVIKKFGPSWVHKKYKDYQVQDMTQPEVLKGRKYRKLVEKAQHASDSAGRSARRQTL
EF3030          LEDDVIKKFGPSWVHKKYKDYQVQDMTQPEVLKGRKYRKLVEKAQHASDSAGRSARRQTL
                ************************************************************

TIGR4           EYAESMNIQRDIVYKERNRLIDGSRDLEDVVVDIIERYTEEVAADHYASRELLFHFIVTN
Hungary19A-6    EYAESMNIQRDIVYKERNRLIDGSRDLEDVVVDIIERYTEEVAADHYASRELLFHFIVTN
EF3030          EYAESMNIQRDIVYKERNRLIDGSRDLEDVVVDIIERYTEEVAADHYASRELLFHFIVTN
                ************************************************************

TIGR4           ISFHVKEVPDYIDVTDKTAVRSFMKQVIDKELSEKKELLNQHDLYEQFLRLSLLKAIDDN
Hungary19A-6    ISFHVKEVPDYIDVTDKTAVRSFMKQVIDKELSEKKELLNQHDLYEQFLRLSLLKAIDDN
EF3030          ISFHVKEVPDYIDVTDKTAVRSFMKQVIDKELSEKKELLNQHDLYEQFLRLSLLKAIDDN
                ************************************************************

TIGR4           WVEQVDYLQQLSMAIGGQSASQKNPIVEYYQEAYAGFEAMKEQIHADMVRNLLMGLVEVT
Hungary19A-6    WVEQVDYLQQLSMAIGGQSASQKNPIVEYYQEAYAGFEAMKEQIRADMVRNLLMGLVEVT
EF3030          WIEQVDYLQQLSMAIGGQSASQKNPIVEYYQEAYAGFEAMKEQIRADMVRNLLMGLVEVT
                *:******************************************:***************

TIGR4           PKGEIVTHFP
Hungary19A-6    PKGEIVTHFP
EF3030          PKGEIVTHFP
                **********

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]