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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003243000
- symbol?: prmA
- synonym:
- description?: 50S ribosomal protein L11 methyltransferase
- 50S ribosomal protein L11 methyltransferase
- ribosomal protein L11 methyltransferase
- Ribosomal protein methyltransferase
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4149469..4150424
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
SPN034156:
SPN034156_RS03475 (prmA)
SPN034183:
SPN034183_RS08435 (prmA)
SPN994038:
SPN994038_RS08335 (prmA)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 METWQELKVTVKREGEELVSNLLIELGAQGVAIEDSMDYVGNVDRFGEIFPEVEQQEEIV
D39 METWQELKVTVKREGEELVSNLLIELGAQGVAIEDSMDYMGNVDRFGEIFPEVEQQEEIV
D39V METWQELKVTVKREGEELVSNLLIELGAQGVAIEDSMDYMGNVDRFGEIFPEVEQQEEIV
Hungary19A-6 METWQELKVTVKREGEELVSNLLIELGAQGVAIEDSMDYVGNVDRFGEIFPEVEQQEEIV
EF3030 METWQELKVTVKREGEELVSNLLIELGAQGVAIEDSMDYVGNMDRFGEIFPEVEQQEEIV
***************************************:**:*****************
TIGR4 VTAYYPDTVDVTVVEADLQARLAELTDFMDLGELKIGTTALAEEDWADNWKKYYEPARIT
D39 VTAYYPDTVDVTVVEADLQARLAELTDFMDLGEVKMGTTALAEEDWADNWKKYYEPARIT
D39V VTAYYPDTVDVTVVEADLQARLAELTDFMDLGEVKMGTTALAEEDWADNWKKYYEPARIT
Hungary19A-6 VTAYYPETVDVATVESDLQARLAELTDFMDLGEVKMGTTALAEEDWADNWKKYYEPARIT
EF3030 VTAYYPDTVDVTVVEADLQARLAELTDFMDLGELKIGTTALAEEDWADNWKKYYEPARIT
******:****:.**:*****************:*:************************
TIGR4 HDLTIVPSWTDYEATAGEMIIKLDPGMAFGTGTHPTTKMSLFALEQVLRGGETVLDVGTG
D39 HDLTIVPSWTDYEATAGEKIIKLDPGMAFGTGTHPTTKMSLFALEQVLRGGETVLDVGTG
D39V HDLTIVPSWTDYEATAGEKIIKLDPGMAFGTGTHPTTKMSLFALEQVLRGGETVLDVGTG
Hungary19A-6 HDLTIVPSWTDYEATAGEMIIKLDPGMAFGTGTHPTTKMSLFALEQVLRGGETVLDVGTG
EF3030 HDLTIVPSWTDYEATAGEMIIKLDPGMAFGTGTHPTTKMSLFALEQVLRGGETVLDVGTG
****************** *****************************************
TIGR4 SGVLSIASSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAGDLLKGVEIEADVI
D39 SGVLSIASSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAGDLLKGVEIEADVI
D39V SGVLSIASSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAGDLLKGVEIEADVI
Hungary19A-6 SGVLSIASSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAGDLLKGVEIEADVI
EF3030 SGVLSIASSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAGDLLKGVEIEADVI
************************************************************
TIGR4 VANILADILIHLIDDAYRLVKDEGYLIMSGIIKDKLDMVRQSAESAGFFLETHMVQGEWN
D39 VANILADILIHLTDDAYRLVKDEGYLIMSGIIKDKWDMVRESAESAGFFLETHMVQGEWN
D39V VANILADILIHLTDDAYRLVKDEGYLIMSGIIKDKWDMVRESAESAGFFLETHMVQGEWN
Hungary19A-6 VANILADILIHLIDDAYRLVKDEGYLIMSGIIKDKWDMVRESAESAGFFLETHMVQGEWN
EF3030 VANILADILIHLIDDAYRLVKDEGYLIMSGIIKDKWDMVRESAESAGFFLETHMVQGEWN
************ ********************** ****:*******************
TIGR4 TCVFKKTKDISGVIGG
D39 ACVFKKTKDISGVIGG
D39V ACVFKKTKDISGVIGG
Hungary19A-6 TCVFKKTKDISGVIGG
EF3030 TCVFKKTKDISGVIGG
:***************