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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003243000
- symbol?: —
- synonym:
- description?: site-2 protease family protein
- site-2 protease family protein
- peptidase, M50 family protein
- putative peptidase
- peptidase M50
- conserved hypothetical membrane protein
- lipoprotein, putative
- peptidase, M50 family
- peptidase M50 family protein
- RIP metalloprotease
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4157122..4158898
- occurrence?: in 98% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKKIGTYLVYVLAVVFIMLAFACGTIAFAELGYSAVLAFTFGYAFALLSMYLIFILHELG
D39 MKKIGTYLVYVLAVVFIMLAFACGTIAFAELGYSAVLAFTFGYAFALLSMYLIFILHELG
D39V MKKIGTYLVYVLAVVFIMLAFACGTIAFAELGYSAVLAFTFGYAFALLSMYLIFILHELG
Hungary19A-6 MKKIGTYLVYVLAVVFIMLAFACGTIAFAELGYSAVLAFTFGYAFALLSMYLIFILHELG
EF3030 MKKIGTYLVYVLAVVFIMLAFACGTIAFAELGYSAVLAFTFGYAFALLSMYLIFILHELG
************************************************************
TIGR4 HAFCGYLTGYRLVAFGLGHFILTKKSGRFHLSRTAILKNVGAQYIGLKEDESDQRIILML
D39 HAFCGYLTGYRLVAFGLGHFILTKKSGRFHLSRTAILKNVGAQYIGLKEDESDQRIILML
D39V HAFCGYLTGYRLVAFGLGHFILTKKSGRFHLSRTAILKNVGAQYIGLKEDESDQRIILML
Hungary19A-6 HAFCGYLTGYRLVAFGLGHFILTKKSGRFHLSRTAILKNVGAQYIGLKEDESDQRIILML
EF3030 HAFCGYLTGYRLVAFGLGHFILTKKSGRFHLSRTAILKNVGAQYIGLKEDESDQRIILML
************************************************************
TIGR4 SGGLMVHLGLILLAILFGFLTRSWYFAGTWIFLNLSFFLNNILPVDITDGAKIWELLQHP
D39 SGGLMVHLGLILLAIVFGFLTRSWYFAGTWIFLNLSFFLNNILPVDITDGAKIWELLQHP
D39V SGGLMVHLGLILLAIVFGFLTRSWYFAGTWIFLNLSFFLNNILPVDITDGAKIWELLQHP
Hungary19A-6 SGGLMVHLGLILLAIVFGFLTRSWYFAGTWIFLNLSFFLNNILPVDITDGAKIWELLQHP
EF3030 SGGLMVHLGLILLAIVFGFLTRSWYFAGTWIFLNLSFFLNNILPVDITDGAKIWELLQHP
***************:********************************************
TIGR4 ENTKYAYLVLRHSAQTLLAPQEYDLKDFVQAVPEDARGSFADGVLGMQGEVSILEGKEEV
D39 ENTKYAYLVLRHSAQTLLAPQEYDLKDFVQAVPEDARGSFADGVLGMQGEVSILEGKEEV
D39V ENTKYAYLVLRHSAQTLLAPQEYDLKDFVQAVPEDARGSFADGVLGMQGEVSILEGKEEV
Hungary19A-6 ENTKYAYLVLRHSAQTLLAPQEYDLKDFVQAVPEDARGSFADGVLGMQGEVSILEGKEEV
EF3030 ENTKYAYLVLRHSAQTLLVPQEYDLKDFVQAVPEDARGSFADGVLGMQGEVSILEGKEEV
******************.*****************************************
TIGR4 AKQQFQALLERTTTPMMQTVAQLSLLHIALLEGDFEQAEQYASIRQVKSFLSLKLSNLQV
D39 AKQQFQALLERATTPMMQTVAQLSLLHIALLEGDFEQAEQYASIRQVKSFLSLKLSNLQV
D39V AKQQFQALLERATTPMMQTVAQLSLLHIALLEGDFEQAEQYASIRQVKSFLSLKLSNLQV
Hungary19A-6 AKQQFQALLERTTTPMMQTVAQLSLLHIALLEGDFEQAEQYASIRQVKSFLSLKLSNLQV
EF3030 AKQQFQALLERTTTPMMQTVAQLSLLHIALLEGDFEQAEQYASIRQVKSFLSLKLSNLQV
***********:************************************************
TIGR4 IQAWYQLKVKKDVDRTRKALKIARQKMDSSRMLRDEKRYYENWLAELEKEMLEGTEDGTR
D39 IQAWYQLKVKKDVDRTRKALKIARQKMDSSRMLRDEKRYYENLLAELEKEMLEGTEDGTR
D39V IQAWYQLKVKKDVDRTRKALKIARQKMDSSRMLRDEKRYYENLLAELEKEMLEGTEDGTR
Hungary19A-6 IQAWYQLKVKKDVDRTRKALKIARQKMDSSRMLRDEKRYYENLLAELEKELAEGV-----
EF3030 IQAWYQLKVKKDVDRTRKALKIARQKMDSSRMLRDEKRYYENLLAELEKELAEGV-----
****************************************** *******: **.
TIGR4 NF-----
D39 NFWFPRL
D39V NFWFPRL
Hungary19A-6 -------
EF3030 -------