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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003364000
- symbol?: piuD
- synonym:
- description?: ATP-binding cassette domain-containing protein
- ATP-binding cassette domain-containing protein
- ferrichrome transport ATP-binding protein FhuC
- ABC transporter ATP-binding protein
- siderophore uptake ATP-binding protein
- iron ABC transporter ATP-binding protein
- Iron(3+)-hydroxamate import ATP-binding protein
- iron-compound ABC transporter, ATP-binding protein
- ABC transporter, ATP-binding protein
- Iron compound ABC uptake transporter ATP-binding protein PiuD
- ABC transporter ATP-binding protein - ferric iron transport
- ABC transporter family protein
- ABC-type enterochelin transport system, ATPase component
- Petrobactin import ATP-binding protein YclP
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4312132..4312884
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKLENIDKSIQKQDILQGISLEVSPQKLTAFIGPNGAGKSTLLSIMSRLTKKDQGVLSIK
D39 MKLENIDKSIQKQDILQGISLEVSPQKLTAFIGPNGAGKSTLLSIMSRLTKKDRGVLSIK
D39V MKLENIDKSIQKQDILQGISLEVSPQKLTAFIGPNGAGKSTLLSIMSRLTKKDRGVLSIK
Hungary19A-6 MKLENIDKSIQKQDILQGISLEVSPQKLTAFIGPNGAGKSTLLSIMSRLTKKDQGVLSIK
EF3030 MKLENIDKSIQKQDILQGISLEVSPQKLTAFIGPNGAGKSTLLSIMSRLTKKDQGVLSIK
*****************************************************:******
TIGR4 GREIESWNSQELAQELTILKQKINYQAKLTVEELVSFGRFPYSRGRLRSEDWEKIRETLN
D39 GREIESWNSQELAQELTILKQKINYQAKLTVEELVSFGRFPYSRGRLRSEDWEKIRETLN
D39V GREIESWNSQELAQELTILKQKINYQAKLTVEELVSFGRFPYSRGRLRSEDWEKIRETLN
Hungary19A-6 GREIESWNSQELAQELTILKQKINYQAKLTVEELVSFGRFPYSRGRLRSEDWEKIRETLN
EF3030 GREIESWNSQELAQELTILKQKINYQAKLTVEELVSFGRFPYSRGRLRSEDWEKIRETLN
************************************************************
TIGR4 YLELTNLKDRYINSLSGGQLQRVFIAMVLAQDTDFILLDEPLNNLDIKQSVSMMQILRRL
D39 YLELTNLKDRYINSLSGGQLQRVFIAMVLAQDTDFILLDEPLNNLDIKQSVSMMQILRRL
D39V YLELTNLKDRYINSLSGGQLQRVFIAMVLAQDTDFILLDEPLNNLDIKQSVSMMQILRRL
Hungary19A-6 YLELTNLKDRYINSLSGGQLQRVFIAMVLAQDTDFILLDEPLNNLDIKQSVSMMQILRRL
EF3030 YLELTNLKDRYINSLSGGQLQRVFIAMVLAQDTDFILLDEPLNNLDIKQSVSMMQILRRL
************************************************************
TIGR4 VEELGKTIIIVLHDINMASQYADEIVAFKDGQVFSKGRTDQIMQADLLSQLYEIPITLAD
D39 VEELGKTIIIVLHDINMASQYADEIVAFKDGQVFSKGRTDQIMQADLLSQLYEIPITLAD
D39V VEELGKTIIIVLHDINMASQYADEIVAFKDGQVFSKGRTDQIMQADLLSQLYEIPITLAD
Hungary19A-6 VEELGKTIIIVLHDINMASQYADEIVAFKDGQVFSKGSTDQIMQADLLSQLYEIPITLAD
EF3030 VEELGKTIIIVLHDINMASQYADEIVAFKDGQVFSKGRTDQIMQADLLSQLYEIPITLAD
************************************* **********************
TIGR4 INDKKICIYS
D39 INDKKICIYS
D39V INDKKICIYS
Hungary19A-6 INDKKICIYS
EF3030 INNKKICIYS
**:*******