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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003389000
- symbol?: galE
- synonym:
- description?: UDP-glucose 4-epimerase GalE
- UDP-glucose 4-epimerase GalE
- NAD-dependent epimerase/dehydratase family protein
- putative UDP-glucose 4-epimerase
- UDP-glucose 4-epimerase
- UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose4-epimerase)
- NAD-dependent epimerase
- UDP-galactose 4-epimerase, truncation
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4444425..4445126
- occurrence?: in 98% of 43 strains
⊟Orthologs[edit | edit source]
SPN034183:
SPN034183_RS08905 (galE)
SPN994038:
SPN994038_RS08810 (galE)
SPN994039:
SPN994039_RS08815 (galE)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MTKTILVTGGTSYIGSHTVKALLNAGYQVHVLDNLSTGNRAAVDSRASFKELDVYDASAL
D39 MTKTILVTGGTSYIGSHTVKALLNAGYQVHILDNLSTGNRAAVDSRASFKELDVYDASAL
D39V MTKTILVTGGTSYIGSHTVKALLNAGYQVHILDNLSTGNRAAVDSRASFKELDVYDASAL
Hungary19A-6 MTKTILVTGGTSYIGSHTVKALLNAGYKVHVLDNLSTGNRATVDNRASFKELDVYDASAL
EF3030 MTKTILVTGGTSYIGSHTVKALLNAGYQVHVLDNLSTGNRAAVDSRASFKELDVYDASAL
***************************:**:**********:**.***************
TIGR4 KAYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKVLSEVGIQKIMFSSTA
D39 KAYLEENQIDAVLHYTGEIVVSESIENPSKYFTANVAGMNQVLKVLSEVGIQKIMFSSTA
D39V KAYLEENQIDAVLHYTGEIVVSESIENPSKYFTANVAGMNQVLKVLSEVGIQKIMFSSTA
Hungary19A-6 KAYLEENQIDAVLHYAGEIVVSESIENPSKYFTANVAGRNQVLKVLSEVGTQKIMFSSTA
EF3030 KAYLEENQIDAVLHCAGEIVVSESIENPSKYFTANVAGMNQVLKVLSEVGIQKIMFSSTA
************** :********************** *********** *********
TIGR4 SLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRYDWKYVIFRYFNVAGAEMD
D39 SLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRYDWKYVIFRYFNVAGAEMD
D39V SLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRYDWKYVIFRYFNVAGAEMD
Hungary19A-6 SLYGNNCIDKPATEDTLIDPVNPYTETKLMGERMIYWMANRYDWKYVIFRYFNVAGAEMD
EF3030 SLYGNNCIDKPVTEDTLLDPVNPYAETKLMGERMIYWMANRYDWKYVIFRYFNVAGAEMD
***********.*****:******:***********************************
TIGR4 ASNGLRVKNPTHIIPNINKTALGQNDSLKIFGDDYDTRDGSCIRDYIYVLDLA
D39 ASNGLRVKNPTHIIPNINKTALGQNDSLKIFGDDYDTRDGSCIRDYIYVLDLA
D39V ASNGLRVKNPTHIIPNINKTALGQNDSLKIFGDDYDTRDGSCIRDYIYVLDLA
Hungary19A-6 ASNGLRVKNPTHIIPNINKTALGQNDSLKIFGDDYDTRDGSCIRDYIYVLDLA
EF3030 ASNGLRVKNPTHIIPNINKTALGQHDSLKIFGDDYDTRDGSCIRDYIYVLDLA
************************:****************************