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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003617000
- symbol?: eloR
- synonym:
- description?: cell elongation regulator EloR
- cell elongation regulator EloR
- jag protein
- putative ssDNA-binding protein
- DNA-binding protein
- protein jag
- putative jag protein
- R3H domain protein
- jag protein, putative
- KH domain RNA-binding protein
- Predicted RNA-binding protein
- protein jag (SpoIIIJ-associated protein), putative
- RNA-binding protein Jag
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4628582..4629568
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MVVFTGSTVEEAIQKGLKELDIPRMKAHIKVISREKKGFLGLFGKKPAQVDIEAISETTV
D39 MVVFTGSTVEEAIQKGLKELDIPRMKAHIKVISREKKGFLGLFGKKPAQVDIEAISETTV
D39V MVVFTGSTVEEAIQKGLKELDIPRMKAHIKVISREKKGFLGLFGKKPAQVDIEAISETTV
Hungary19A-6 MVVFTGSTVEEAIQKGLKELDIPRMKAHIKVISREKKGFLGLFGKKPAQVDIETISETTV
EF3030 MVVFTGSTVEEAIQKGLKELDIPRMKAHIKVISREKKGFLGLFGKKPAQVDIEAISETTV
*****************************************************:******
TIGR4 VKANQQVVKGVPKKINDLNEPVKTVSEETVDLGHVVDAIKKIEEEGQGISDEVKAEILKH
D39 VKANQQVVKGVPKKINDLNEPVKTVSEETVDLGHVVDAIKKIEEEGQGISDEVKAEILKH
D39V VKANQQVVKGVPKKINDLNEPVKTVSEETVDLGHVVDAIKKIEEEGQGISDEVKAEILKH
Hungary19A-6 VKANQQVVKGVPKKINDLNEPVKTVSEETVDLGHVVDAIKKIEEEGQGISDEVKAEILKH
EF3030 VKANQQVVKGVPKKINDLNEPVKTVSEETVDLGHVVNAIKKIEEEGQGISDEVKAEILKH
************************************:***********************
TIGR4 ERHASTILEETGHIEILNELQIEEAMREEAGADDLETEQDQAESQELEDLGLKVETNFDI
D39 ERHASTILEETGHIEILNELQIEEAMREEAGADDLETEQDQAESQELEDLGLKVETNFDI
D39V ERHASTILEETGHIEILNELQIEEAMREEAGADDLETEQDQAESQELEDLGLKVETNFDI
Hungary19A-6 ERHASTILEETGHIEILNELQIEEAMREEAGADDLETEQDQAESQELEDLGLKVETNFDI
EF3030 ERHASTILEETGHIEILNELQIEEAMREEAGADDLETEQDQTENQDLKEMGLKVEQSYDI
*****************************************:*.*:*:::***** .:**
TIGR4 EQVATEVMAYVQTIIDDMDVEATLSNDYNRRSINLQIDTNEPGRIIGYHGKVLKALQLLA
D39 EQVATEVMAYVQTIIDDMDVEATLSNDYNRRSINLQIDTNEPGRIIGYHGKVLKALQLLA
D39V EQVATEVMAYVQTIIDDMDVEATLSNDYNRRSINLQIDTNEPGRIIGYHGKVLKALQLLA
Hungary19A-6 EQVATEVMAYVQTIIDDMDVEATLSNDYNRRSINLQIDTNEPGRIIGYHGKVLKALQLLA
EF3030 AQVATDVTAYVQAIVDDMDVEATLSNDYNRRSINLQIDTNEPGRIIGYHGKVLKALQLLA
****:* ****:*:*********************************************
TIGR4 QNYLYNRYSRTFYVTINVNDYVEHRAEVLQTYAQKLATRVLEEGRSHKTDPMSNSERKII
D39 QNYLYNRYSRTFYVTINVNDYVEHRAEVLQTYAQKLATRVLEEGRSHKTDPMSNSERKII
D39V QNYLYNRYSRTFYVTINVNDYVEHRAEVLQTYAQKLATRVLEEGRSHKTDPMSNSERKII
Hungary19A-6 QNYLYNCYSRTFYITINVNDYVEHRAEVLQTYAQKLAIRVLEEGRSHQTDPMSNSERKII
EF3030 QNYLYNRYSKTFYVTINVNDYVEHRAEVLQTYAQKLANRVLEEGRSHKTDPMSNSERKII
****** **:***:*********************** *********:************
TIGR4 HRIISRMDGVTSYSEGDEPNRYVVVDTE
D39 HRIISRMDGVTSYSEGDEPNRYVVVDTE
D39V HRIISRMDGVTSYSEGDEPNRYVVVDTE
Hungary19A-6 HRIISRMDGVTSYSEGDEPNRYVVVDTE
EF3030 HRIISRMDGVTSYSEGDEPNRYVVVDTE
****************************