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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003625000
- symbol?: ulaR
- synonym:
- description?: transcription antiterminator
- transcription antiterminator
- transcriptional regulator, BglG family
- putative transcriptional antiterminator
- putative licABCH operon regulator
- L-ascorbate-6-phosphate lactonase
- BglG family transcriptional regulator
- Transcriptional antiterminator
- ascorbate 6-phosphate lactonase
- Conserved hypothetical protein
- HTH domain protein
- PRD domain protein
- Transcriptional antiterminator with PTS regulation domain, SPy0181 ortholog
- transcriptional regulator, BglG family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4636971..4638644
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MVLDKASCDLLQYLMDQETSKTIMAISKDLKESRRKIYYHIDKINAALGDEALHIISIPR
D39 MVLDKASCDLLQYLMDQETSKTIMAISKDLKESRRKIYYHIDKINAALGDEALHIISIPR
D39V MVLDKASCDLLQYLMDQETSKTIMAISKDLKESRRKIYYHIDKINAALGDEALHIISIPR
Hungary19A-6 MVLDKASCDLLQYLMDQETSKTIMAISKDLKESRRKIYYHIDKINAALVDEALHIISIPR
EF3030 MVLDKASCDLLQYLMDQETSKTIMAISKDLKESRRKIYYHIDKINAALGDEALHIISIPR
************************************************ ***********
TIGR4 IGIHLTEEQRDACCKLLSEVDSYDYIMSAHERMMIMLLWIGISKERITIEKLIELTEVSR
D39 IGIHLTEEQRDACCKLLSEVDSYDYIMSAHERMMIMLLWIGISKERITIEKLIELTEVSR
D39V IGIHLTEEQRDACCKLLSEVDSYDYIMSAHERMMIMLLWIGISKERITIEKLIELTEVSR
Hungary19A-6 IGIHLTEEQRDACCKLLSEVDSYDYIMSAHERMMIMLLWIGISKERITIEKLIELTEVSR
EF3030 IGIHLTEEQRDACCKLLSEVDSYDYIMSAHERMMIMLLWIGISKERITIEKLIELTEVSR
************************************************************
TIGR4 NTVLNDLNSIRYQLTLEQYQVILQVSKSQGYNLHAHPLNKIQYLQSLLYHIFMEENATFV
D39 NTVLNDLNSIRYQLTLEQYQVTLQVSKSQGYHLHAHPLNKIQYLQSLLYHIFMEENATFV
D39V NTVLNDLNSIRYQLTLEQYQVTLQVSKSQGYHLHAHPLNKIQYLQSLLYHIFMEENATFV
Hungary19A-6 NTVLNDLNSIRYQLTLEQYQVTLQVSKSQGYHLHAHPLNKIQYLQSLLYHIFMEENATFV
EF3030 NTVLNDLNSIRYQLTLEQYQVILQVSKSQGYHLHAHPLNKIQYLQSLLYHIFMEENATFV
********************* *********:****************************
TIGR4 SILEDKMKERLDDECLLSVEMNQFFKEQVPLVEQDLGKKINHHEITFMLQVLPYLLLSCH
D39 SILEDKMKERLDDECLLSVEMNQFFKEQVPLVEQDLGKKINHHEITFMLQVLPYLLLSCH
D39V SILEDKMKERLDDECLLSVEMNQFFKEQVPLVEQDLGKKINHHEITFMLQVLPYLLLSCH
Hungary19A-6 SILEDKMKERLDDECLLSVEMNQFFKEQVPLVEQDLGKKINHHEITFMLQVLPYLLLSCH
EF3030 SILEDKMKERLDDECLLSVEMNQFFKEQVPLVEQDLGKKINHHEITFMLQVLPYLLLSCH
************************************************************
TIGR4 NVEQYQERHQDIEKEFSLIRKRIEYQVSKKLGERLFQKFEISLSGLEVSLVAVLLLSYRK
D39 NVEQYQERHQDIEKEFSLIRKRIEYQVSKKLGERLFQKFEISLSGLEVSLVAVLLLSYRK
D39V NVEQYQERHQDIEKEFSLIRKRIEYQVSKKLGERLFQKFEISLSGLEVSLVAVLLLSYRK
Hungary19A-6 NVEQYQERHQDIEKEFSLIRKRIEYQVSKKLGERLFQKFEISLSGLEVSLVAVLLLSYRK
EF3030 NVEQYQERHQDIEKEFALIRKRIEYQVSKKLGERLFQKFEISLSGLEVSLVAVLLLSYRK
****************:*******************************************
TIGR4 DLDIHAESDDFRQLKLALEEFIWYFESQIRMEIENKDDLLRNLMIHCKALLFRKTYGIFS
D39 DLDIHAESDDFRQLKLALEEFIWYFESQIRMEIENKDDLLRNLMIHCKSLLFRKTYGIFS
D39V DLDIHAESDDFRQLKLALEEFIWYFESQIRMEIENKDDLLRNLMIHCKSLLFRKTYGIFS
Hungary19A-6 DLDIHAESDDFRQLKLALEEFIWYFESQIRMEIENKDDLLRNLMIHCKALLFRKTYGIFS
EF3030 DLDIHAESDDFRQLKLALEEFIWYFESQIRMEIENKDDLLRNLMIHCKALLFRKTYGIFS
************************************************:***********
TIGR4 KNPLTKQIRSKYGELFLVTRKSAEILEGAWFIRLTDDDIAYLTIHIGGFLKYTPSSQKNM
D39 KNPLTKQIRSKYGELFLVTRKSAEILEGAWFIRLTDDDIAYLTIHIGGFLKYTPSSQKNM
D39V KNPLTKQIRSKYGELFLVTRKSAEILEGAWFIRLTDDDIAYLTIHIGGFLKYTPSSQKNM
Hungary19A-6 KNPLTKQIRSKYGELFLVTRKSAEILEGAWFIRLTDDDIAYLTIHIGGFLKYTPSSQKNM
EF3030 KNPLTKQIRSKYGELFLVTRKSAEILEGAWFIRLTDDDIAYLTIHIGGFLKYTPSSQKNM
************************************************************
TIGR4 KKVYLVCDEGVAVSRLLLKQCKLYFPNEQIDTVFTTEQFKSVEDIAQVDVVITTNDDLDS
D39 KKVYLVCDEGVAVSRLLLKQCKLYFPNEQIDTVFTTEQFKSVEDIAQVDVVITTNDDLDS
D39V KKVYLVCDEGVAVSRLLLKQCKLYFPNEQIDTVFTTEQFKSVEDIAQVDVVITTNDDLDS
Hungary19A-6 KKVYLVCDEGVAVSRLLLKQCKLYFPNEQIDTVFTTEQFKSVEDIAQVDVVITTNDDLDS
EF3030 KKVYLVCDEGVAVSRLLLKQCKLYFPNEQIDTVFTTEQFKSVEDIAQVDVVITTNDDLDS
************************************************************
TIGR4 RFPILRVNPILEAEDILKMLDYLKHNIFRNKSKSFSENLSSLISSYIVDSKLASKFQEEV
D39 RFPILRVNPILEAEDILKMLDYLKHNIFRNESKSFSENLSSLISSYIVDSKLASKFQEEV
D39V RFPILRVNPILEAEDILKMLDYLKHNIFRNESKSFSENLSSLISSYIVDSKLASKFQEEV
Hungary19A-6 RFPILRVNPILEAEDILKMLDYLKHNIFRNKSKSFSENLSSLISSYIVDSKLASKFQEEV
EF3030 RFPILRVNPILEAEDILKMLDYLKHNIFRNESKSFSENLSSLISSYIVDSKLASKFQEEV
******************************:*****************************
TIGR4 QTLINQEIVVQAFLEDI
D39 QTLINQEIVVQAFLEDI
D39V QTLINQEIVVQAFLEDI
Hungary19A-6 QTLINKEIVVQAFLEDI
EF3030 QTLINQEIVVQAFLEDI
*****:***********