Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003808000
- symbol?: fucA
- synonym:
- description?: class II aldolase/adducin family protein
- class II aldolase/adducin family protein
- L-fuculose phosphate aldolase
- aldolase
- L-fuculose-phosphate aldolase, putative
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4886073..4899471
- occurrence?: in 34% of 41 strains
⊟Orthologs[edit | edit source]
TIGR4:
—
D39:
—
D39V:
—
A026:
—
A66:
—
AP200:
—
gamPNI0373:
—
HU-OH:
—
Hu15:
—
Hu17:
—
INV104:
—
INV200:
—
Taiwan19F-14:
—
TCH8431/19A:
—
Xen35:
—
⊟Genome Viewer[edit | edit source]
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MRIKWFSLIRIIGLLLVLLYHFFQTIFPGGFFGVDVFFTFSGFLITALLIEEFSKNNEID
D39 MRIKWFSLIRIIGLLLVLLYHFFQTIFPGGFFGVDVFFTFSGFLITALLIEEFSKNNEID
D39V MRIKWFSLIRIIGLLLVLLYHFFQTIFPGGFFGVDVFFTFSGFLITALLIEEFSKNNEID
Hungary19A-6 MRIKWFSLIRITGLLLVLLYHFFQTIFPGGFFGVDVFFTFSGFLITALLIEEFSKNHEID
EF3030 MRIKWFSLIRIIGLLLVLLYHFFQTIFPGGFFGVDVFFTFSGFLITALLIEEFSKNNEID
*********** ********************************************:***
TIGR4 LIGFFRRRFYRIVPPVVLMVLVTMPFTFLVRQDYVAGIGGQIAGVLGFMTNFYELLTGGS
D39 LIGFFRRRFYRIVPPVVLMVLVTMPFTFLVRQDYVAGIGGQIAGVLGFMTNFYELLTGGS
D39V LIGFFRRRFYRIVPPVVLMVLVTMPFTFLVRQDYVAGIGGQIAGVLGFMTNFYELLTGGS
Hungary19A-6 LVGFFRRRFYRIVPPVVLMVLVTMPFTFLVRQDYVAGIGGQIAGVLGFMTNFYELLTGGS
EF3030 LIGFFRRRFYRIVPPVVLMVLVTMPFTFLVRQDYVAGIGGQIAGVLGFMTNFYELLTGGS
*:**********************************************************
TIGR4 YESQFIPHLFVHNWSLAVEVHYYILWGLAVWFLSKQAKSNGQLKGMVFLLSAVAFLISFF
D39 YESQFIPHLFVHNWSLAVEVHYYILWGLAVWFLSKQAKSNGQLKGMVFLLSAVAFLISFF
D39V YESQFIPHLFVHNWSLAVEVHYYILWGLAVWFLSKQAKSNGQLKGMVFLLSAVAFLISFF
Hungary19A-6 YESQFIPHLFVHNWSLAVEVHYYILWGLAVWFLSKQAKSNGQLRGMVFLLSVAAFLISFF
EF3030 YESQFIPHLFVHNWSLAVEVHYYILWGLAVWFLSKQAKSNGQLKGMVFLLSAAAFLISFF
*******************************************:*******..*******
TIGR4 SMFIGSFLVTSYSSVYFSSLTHVYPFFLGSMLATIVGVRQTTSLVKQLDKIWDLRKTLVV
D39 SMFIGSFLVTSYSSVYFSSLTHVYPFFLGSMLATIVGVRQTTSLVKQLDKIWDLRKTLVV
D39V SMFIGSFLVTSYSSVYFSSLTHVYPFFLGSMLATIVGVRQTTSLVKQLDKIWDLRKTLVV
Hungary19A-6 SMFIGSFLVTSYSSVYFSSLTHVYPFFLGSILATIVGVRQTTSLVKQLDKIWDLRKTLLV
EF3030 SMFIGSFLVTSYSSVYFSSLTHVYPFFLGSMLATIVGVRQTTSLVKQLDKIWDLRKTLVV
******************************:***************************:*
TIGR4 FGGGFGFLVLLTFFVKFTYLFAYLIGFLLASLAALAMILAARVLHEKTHHIQESKIISFL
D39 FGGGFGFLVLLTFFVKFTYLFAYLIGFLLASLAALAMILAARVLHEKTHHIQESKIISFL
D39V FGGGFGFLVLLTFFVKFTYLFAYLIGFLLASLAALAMILAARVLHEKTHHIQESKIISFL
Hungary19A-6 FAGGFGFLLILTFFVKFTYLFAYLIGFLLASLAALSMILAARVLHEKTPNVQEPKMISFL
EF3030 FGGGFGFLVLLTFFVKFTYLFAYLIGFLLASLAALAMILAARVLHEKTHHIQEPKIISFL
*.******::*************************:************ ::**.*:****
TIGR4 ADTSYAVYLFHWPFYIIFSQLTSNLLAVLLTLICSYGFASLSFYVLEPWIAGKNTPIVQT
D39 ADTSYAVYLFHWPFYIIFSQLTSNLLAVLLTLICSYGFASLSFYVLEPWIAGKNTPIVQT
D39V ADTSYAVYLFHWPFYIIFSQLTSNLLAVLLTLICSYGFASLSFYVLEPWIAGKNTPIVQT
Hungary19A-6 ADTSYAVYLFHWPFYIIFSQLTSNLLAVLLTLIFSYGFASLSFYVLEPWIAGKNTPVLQT
EF3030 ADTSYAVYLFHWPSYIIFSQLTSNLLAVLLTLICSYGFASLSFYVLEPWIAGKNTPILQT
************* ******************* **********************::**
TIGR4 LRPLPYIHAILAAGTGILTIIVCTVTLLAPQVGAFETDLTVNGLKQAATNIGQTKVMAER
D39 LRPLPYIHAILAAGTGILTIIVCTVTLLAPQVGAFETDLTVNGLKQAATNIGQTKVMAER
D39V LRPLPYIHAILAAGTGILTIIVCTVTLLAPQVGAFETDLTVNGLKQAATNIGQTKVMAER
Hungary19A-6 IRPLPYIHAILATSTGILALIVFLVTLLAPQVGAFETDLTVNGLKQAASNIAQTKVMAER
EF3030 LRPLPYIHAILAAGTGILTFIVCMVTLLAPQVGAFETDLTVNGLKQAATNIGQTKVMAER
:***********:.****::** ************************:**.********
TIGR4 ADANSLGIADGTMLIGDSVALRANTALQTALPGAQINAQVSVTTKTANEIMLNNSQNKFL
D39 ADANSLGIADGTMLIGDSVALRANTALQTALPGAQINAQVSVTTKTANEIMLNNSQNKFL
D39V ADANSLGIADGTMLIGDSVALRANTALQTALPGAQINAQVSVTTKTANEIMLNNSQNKFL
Hungary19A-6 AEADSLGIADGTMLIGDSVALRANTALQTALPGAQINAQVSRTTKTANEIMLNNSQNKFL
EF3030 ADANSLGIADGTMLIGDSVALRANTALQTALPGAQINAQVSVTTKTANEIMLNNSQNKFL
*:*:************************************* ******************
TIGR4 PKTVVIATGVNNPENYKDDWDSIVKNLPKGHHMILVTPYEGDKTKETYAIVEKAAAYMRE
D39 PKTVVIATGVNNPENYKDDWDSIVKNLPKGHHMILVTPYEGDKTKETYAIVEKAAAYMRE
D39V PKTVVIATGVNNPENYKDDWDSIVKNLPKGHHMILVTPYEGDKTKETYAIVEKAAAYMRE
Hungary19A-6 PKMVVIATGVNNPENYKEDWDSIVKNLPKGHHMVLVTPYEGDKTKETYAIVEKAAAYMRE
EF3030 PKTVVIATGVNNPENYKDDWDSIVKNLPKGHRMILVTPYEGDKTKETYAIVEKAAAYMRE
** **************:*************:*:**************************
TIGR4 LAEKTPYITIADWNQVAKEHPEIWAGTDQVHFGSESSTIEAGAKLYADTIATALQTAQDK
D39 LAEKTPYITIADWNQVAKEHPEIWAGTDQVHFGSESSTIEAGAKLYADTIATALQTAQDK
D39V LAEKTPYITIADWNQVAKEHPEIWAGTDQVHFGSESSTIEAGAKLYADTIATALQTAQDK
Hungary19A-6 LAEKTPYITIADWNQVAKEHPEIWAGTDQVHFGSDTSTIEAGAKLYADTIATALQTAQDK
EF3030 LAEKTPYITIADWNQVAKEHPEIWAGTDQVHFGSESSTIEAGAKLYADTIATALQTAQDK
**********************************::************************
TIGR4 PVKSK
D39 PVKSK
D39V PVKSK
Hungary19A-6 PVKSK
EF3030 PVKSK
*****