PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN003808000
• symbol^?: rgg
• synonym:
• description^?: quorum-sensing system transcriptional regulator Rgg

  descriptions from strain specific annotations:

  • quorum-sensing system transcriptional regulator Rgg
  • Positive transcriptional regulator of glucosyltransferase and Spp phenotype
  • putative DNA-binding protein
  • MutR family transcriptional regulator
  • Positive transcriptional regulator, MutR family
  • transcriptional activator, Rgg/GadR/MutR family protein
  • Predicted transcriptional regulator
  • Rgg/GadR/MutR family transcriptional regulator
  • transcriptional activator%2C Rgg/GadR/MutR family protein
  • transcriptional activator, Rgg/GadR/MutR family
  • transcriptional activator, Rgg/GadR/MutR family, C-terminal domain protein
  • transcriptional activator, Rgg/GadR/MutR family domain protein
  • transcriptional activator, Rgg/GadR/MutR family protein, C-terminal domain
  • transcriptional regulator MutR, putative
  • pseudogene
• strand^?: -
• coordinates^?: 4970759..4971610
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS10835 (rgg)
(2)
D39:
SPD_RS10340 (rgg)
(2)
D39V:
SPV_RS10340 (rgg)
(19A)
Hungary19A-6:
SPH_RS11345 (rgg)
(19F)
EF3030:
EF3030_RS10490 (rgg)
(6B)^?
670-6B:
SP670_RS11535 (rgg)
(6A)
6A-10:
HKM25_RS10810 (rgg)
(5)
70585:
SP70585_RS11170 (rgg)
(19F)
A026:
T308_RS10355 (rgg)
(3)
A66:
A66_RS09690 (rgg)
(11A)
AP200:
SPAP_RS10750 (rgg)
(12F)
ASP0581:
EL334_RS11090 (rgg)
(19F)
ATCC 49619:
EL263_RS10640 (rgg)
(23F)
ATCC 700669:
SPN23F_RS11085 (rgg)
(19F)
BM6001:
ODS73_RS11440 (rgg)
(1)
BVJ1JL:
JN057_RS10490 (rgg)
(14)
CGSP14:
SPCG_RS11080 (rgg)
(19F)
G54:
SPG_RS10320 (rgg)
(1)
gamPNI0373:
HMPREF1038_RS10510 (rgg)
(3)
HU-OH:
EL271_RS10620 (rgg)
(19A)
Hu15:
SPNHU15_RS10225 (rgg)
(19A)
Hu17:
SPNHU17_RS10210 (rgg)
(1)
INV104:
INV104_RS10755 (rgg)
(14)
INV200:
SPNINV200_RS10500 (rgg)
(14)
JJA:
SPJ_RS10655 (rgg)
(19F)
MDRSPN001:
MDRSPN_RS10175 (rgg)
(1)
NCTC7465:
AT689_RS03240 (rgg)
(2)
NCTC7466:
DQM66_RS10335 (rgg)
(4)
NU83127:
EL277_RS11035 (rgg)
(3)
OXC141:
SPNOXC_RS10410 (rgg)
(1)
P1031:
SPP_RS10755 (rgg)
(2)
R6:
SPR_RS09860 (rgg)
(19A)
SP49:
BMJ42_RS11600 (rgg)
(1)
SPN032672:
SPN032672_RS05090 (rgg)
(3)
SPN034156:
SPN034156_RS05415 (rgg)
(3)
SPN034183:
SPN034183_RS10425 (rgg)
(3)
SPN994038:
SPN994038_RS10335 (rgg)
(3)
SPN994039:
SPN994039_RS10340 (rgg)
(3)
SPNA45:
SPNA45_RS00485 (rgg)
(19F)
ST556:
MYY_RS10780 (rgg)
(19F)
Taiwan19F-14:
SPT_RS10575 (rgg)
(19A)
TCH8431/19A:
HMPREF0837_RS00695 (rgg)
(4)
Xen35:
CXP32_RS10975 (rgg)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  D39             MEQIGKVFRQLRESRNISLRQATGGQFSPSMLSRFETGQSELLVEKFLFALENISASVEE
  D39V            MEQIGKVFRQLRESRNISLRQATGGQFSPSMLSRFETGQSELLVEKFLFALENISASVEE
  Hungary19A-6    MEQIGKVFRQLRESRNISLRQATGGQFSPSMLSRFETGQSELSVEKFLFALENISASVEE
  EF3030          MEQIGKVFRQLRESRNISLRQATGGQFSPSMLSRFETGQSELSVEKFLFALENISASVEE
                  ****************************************** *****************
  
  D39             ILFLARGFQYDTDSELRKEITDVLEPKNIAPLEDLYRREYQKHAHSYNKQKHILNAIIIK
  D39V            ILFLARGFQYDTDSELRKEITDVLEPKNIAPLEDLYRREYQKHAHSYNKQKHILNAIIIK
  Hungary19A-6    ILFLARGFQYDTDSELRKEITDVLEPKNIAPLEDLYRREYQKHAHSHNKQKHILNAIIIK
  EF3030          ILFLARGFQYDTDSELRKEITDVLEPKNIAPLEDLYRREYQKHAHSHNKQKHILNAIIIK
                  **********************************************:*************
  
  D39             SYMKSIDERVDLTAEEGKVLHDYLFSTEIWGIYELNLFSVSSPFLSVSLFTRYVREMVRK
  D39V            SYMKSIDERVDLTAEEGKVLHDYLFSTEIWGIYELNLFSVSSPFLSVSLFTRYVREMVRK
  Hungary19A-6    SYMKSIDERVELTAEEGKVLHDYLFSTEIWGIYELNLFSVSSPFLSVSLFTRYVREMVRK
  EF3030          SYMKSMDERVELTAEEGKVLHDYLFSTEIWGIYELNLFSVSSPFLSVSLFTRYVREMVRK
                  *****:****:*************************************************
  
  D39             SDFLMEMSGNRNFFHTILLNGFLASIECEKFTNAYYFKRVIEEHFYKENETYFRIVYLWA
  D39V            SDFLMEMSGNRNFFHTILLNGFLASIECEKFTNAYYFKRVIEEHFYKENETYFRIVYLWA
  Hungary19A-6    SDFLMEMSGNRNLFHTILLNGFLASIECEEFTNAYYFKRVIEEHFYKENETYFRIVYLWA
  EF3030          SDFLMEMSGNRNLFHTILLNGFLASIECEEFTNAYYFKRVIEEHFYKENETYFRIVYLWA
                  ************:****************:******************************
  
  D39             EGLLDSKQGRVKEGQKKMEDAVRIFEMLGCNKSAEYYRNTTEC
  D39V            EGLLDSKQGRVKEGQKKMEDAVRIFEMLGCNKSAEYYRNTTEC
  Hungary19A-6    EGLLDSKQGRVKEGQKKMEDAVRIFEMLGCNKSAEYYRNTTEC
  EF3030          EGLLDSKQGRVKEGQKKMEDAVRIFEMLGCNKSAEYYRNTTEC
                  *******************************************