Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003826000
- symbol?: pepV
- synonym:
- description?: dipeptidase
- dipeptidase
- Putative dipeptidase
- putative petidase
- ArcT
- Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
- Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like deacylases
- Conserved hypothetical protein
- dipeptidase family protein
- M20A subfamily peptidase
- peptidase, M20/M25/M40 family
- peptidase, M20/M25/M40 family protein
- Peptidase family M20/M25/M40
- Putative Xaa-His dipeptidase
- Sapep family Mn(2+)-dependent dipeptidase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4905897..4907228
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKIDITNQVKDEFLISLKTLISYPSVLNEGENGTPFGQAIQDVLEKTLEICRDIGFTTYL
D39 MKIDITNQVKDEFLISLKTLISYPSVLNEGENGTPFGQAIQDVLEKTLEICRDIGFTTYL
D39V MKIDITNQVKDEFLISLKTLISYPSVLNEGENGTPFGQAIQDVLEKTLEICRDIGFTTYL
Hungary19A-6 MKIDITNQVKDEFLISLKTLISYPSVLNEGENGTPFGQAIQDVLEKTLEICRDIGFTTYL
EF3030 MKIDITNQVKDEFLISLKTLISYPSVLNEGENGTPFGQAIQDVLEKTLEICRDIGFTTYL
************************************************************
TIGR4 DPKGYYGYAEIGQGAELLAILCHLDVVPSGDEADWQTPPFEATIKDGWVFGRGVQDDKGP
D39 DPKGYYGYAEIGQGAELLAILCHLDVVPSGDEADWQTPPFEATIKDGWVFGRGVQDDKGP
D39V DPKGYYGYAEIGQGAELLAILCHLDVVPSGDEADWQTPPFEATIKDGWVFGRGVQDDKGP
Hungary19A-6 DPKGYYGYAEIGQGAELLAILCHLDVVPSGDEADWQTPPFEATIKDGWVFGRGVQDDKGP
EF3030 DPKGYYGYAEIGQGAELLAILCHLDVVPSGDEADWQTPPFEATIKDGWVFGRGVQDDKGP
************************************************************
TIGR4 SLAALYAVKSLLDQGIQFKKRVRFIFGTDEETLWRCMARYNTIEEQASMGFAPDSSFPLT
D39 SLAALYAVKSLLDQGIQFKKRVRFIFGTDEETLWRCMARYNTIEEQASMGFAPDSSFPLT
D39V SLAALYAVKSLLDQGIQFKKRVRFIFGTDEETLWRCMARYNTIEEQASMGFAPDSSFPLT
Hungary19A-6 SLAALYAVKSLLDQGIQFKKRVRFIFGTDEETLWRCMARYNTIEEQASMGFAPDSSFPLT
EF3030 SLAALYAVKSLLDQGIQFKKRVRFIFGTDEETLWRCMARYNTIEEQASMGFAPDSSFPLT
************************************************************
TIGR4 YAEKGLLQVKLHGPGSDQLELEVGGAFNVVPDKANYQGLLYEQVCNGLKEAGYDYQTTEQ
D39 YAEKGLLQVKLHGPGSDQLELEVGGAFNVVPDKANYQGLLYEQVCNGLKEAGYDYQTTEQ
D39V YAEKGLLQVKLHGPGSDQLELEVGGAFNVVPDKANYQGLLYEQVCNGLKEAGYDYQTTEQ
Hungary19A-6 YAEKGLLQVKLHGPGSDQLELEVGGAFNVVPDKANYQGLLYEQVCNGLKEAGYDYQTTEQ
EF3030 YAEKGLLQVKLHGPGSDQLELEVGGAFNVVPDKANYQGPLYEQVCNGLKEAGYDYQTTEQ
************************************** *********************
TIGR4 TVTVLGVPKHAKDASQGINAVIRLATILAPLQEHPALSFLATQAGQDGTGRQIFGDIADE
D39 TVTVLGVPKHAKDASQGINAVIRLATILAPLQEHPALSFLATQAGQDGTGRQIFGDIADE
D39V TVTVLGVPKHAKDASQGINAVIRLATILAPLQEHPALSFLATQAGQDGTGRQIFGDIADE
Hungary19A-6 TVTVLGVPKHAKDASQGINAVIRLATILAPLQEHPALSFLATQAGQDGTGRQIFGDIADE
EF3030 TVTVLGVPKHAKDASQGINAVIRLATILAPLQEHPALSFLATQAGQDGTGRQIFGDIADE
************************************************************
TIGR4 PSGHLSFNVAGLMINHERSEIRIDIRTPVLADKEELVELLTRCAQNYQLRYEEFDYLAPL
D39 PSGHLSFNVAGLMINHERSEIRIDIRTPVLADKEELVELLTRCAQNYQLRYEEFDYLAPL
D39V PSGHLSFNVAGLMINHERSEIRIDIRTPVLADKEELVELLTRCAQNYQLRYEEFDYLAPL
Hungary19A-6 PSGHLSFNVAGLMINHERSEIRIDIRTPVLADKEELVELLTRCAQNYQLRYEEFDYLAPL
EF3030 PSGHLSFNVAGLMINHERSEIRIDIRTPVLADKEELVELLTRCAQNYQLRYEEFDYLAPL
************************************************************
TIGR4 YVAEDSKLVSTLMQIYQEKTGDNSPAISSGGATFARTMPNCVAFGALFPGAKQTEHQANE
D39 YVAKDSKLVSTLMQIYQEKTGDNSPAISSGGATFARTMPNCVAFGALFPGAKQTEHQANE
D39V YVAKDSKLVSTLMQIYQEKTGDNSPAISSGGATFARTMPNCVAFGALFPGAKQTEHQANE
Hungary19A-6 YVAKDSKLVSTLMQIYQEKTGDNSPAISSGGATFARTMPNCVAFGALFPGAKQTEHQANE
EF3030 YVAKDSKLVSTLMQIYQEKTGDNSPAISSGGATFARTMPNCVAFGALFPGAKQTEHQANE
***:********************************************************
TIGR4 CAVLEDLYRAMDIYAEAVYRLAT
D39 CAVLEDLYRAMDIYAEAVYRLAT
D39V CAVLEDLYRAMDIYAEAVYRLAT
Hungary19A-6 CAVLEDLYRAMDIYAEAVYRLAT
EF3030 CAVLEDLYRAMDIYAEAVYRLAT
***********************