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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003834000
- symbol?: fucK
- synonym:
- description?: rhamnulokinase
- rhamnulokinase
- putative fuculokinase
- rhamnulokinase (Rhamnulose kinase)
- L-Rhamnulokinase
- L-fuculose kinase
- L-fuculose kinase FucK, putative
- L-fuculokinase
- L-fuculose kinase fucK
- carbohydrate kinase, FGGY family protein
- FGGY family of carbohydrate kinase, N-terminal domain protein
- Fucose kinase
- L-fuculose phosphate aldolase
- putative fuculokinase (pseudogene)
- putative L-fuculose kinase fucK
- Sugar (pentulose and hexulose) kinase
- sugar kinase
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4948597..5022687
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MEAVLAIDLGATSGRAIVGYLSENKLVMEEINRFSNLPIRVKGHLSWDIDFLLAKILESI
D39 MEAVLAIDLGATSGRAIVGYLSENKLVMEEINRFSNLPIRVKGHLSWDIDFLLAKILESI
D39V MEAVLAIDLGATSGRAIVGYLSENKLVMEEINRFSNLPIRVKGHLSWDIDFLLAKILESI
Hungary19A-6 MEAVLAIDLGATSGRAIVGYLSENKLVMEEINRFSNLPIRVKGHLSWDIDFLLAKILESI
EF3030 MEAVLAIDLGATSGRAIVGYLSENKLVMEEINRFSNLPIRVKGHLSWDIDFLLAKILESI
************************************************************
TIGR4 RLANTSYKILSIGIDTWGVDFGLIDNEGKLLLQPVHYRDERTKGVLKEISEMTELEKLYS
D39 RLANTSYKILSIGIDTWGVDFGLIDNEGKLLLQPVHYRDERTKGVLKEISEMTELEKLYS
D39V RLANTSYKILSIGIDTWGVDFGLIDNEGKLLLQPVHYRDERTKGVLKEISEMTELEKLYS
Hungary19A-6 RLANTSYKILSIGIDTWGVDFGLIDNEGKLLSQPVHYRDERTKGVLKEISEMTELEKLYS
EF3030 RLANTSYKILSIGIDTWGVDFGLIDNEGKLLLQPVHYRDERTKGVLKEISEMTELEKLYS
******************************* ****************************
TIGR4 ETGNQIMEINTLFQLFKARQESPDSFYKTNKILLMPDLFNYLLTGKFATEKSIASTTQLF
D39 ETGNQIMEINTLFQLFKARQESPDSFYKTNKILLMPDLFNYLLTGKFATEKSIASTTQLF
D39V ETGNQIMEINTLFQLFKARQESPDSFYKTNKILLMPDLFNYLLTGKFATEKSIASTTQLF
Hungary19A-6 ETGNQIMEINTLFQLFKARQESPDSFYKTNKILLMPDLFNYLLTGKFATEKSIASTTQLF
EF3030 ETGNQIMEINTLFQLFKARQESPDSFYKTNKILLMPDLFNYLLTGKFATEKSIASTTQLF
************************************************************
TIGR4 DPRSQNWNQNILKLFELDSSLLPEIVSEGNVLGRIKEEYGLGDIPVVNVCSHDTASAIVS
D39 DPRSQNWNQNILKLFELDSSLLPEIVSEGNVLGRIKEEYGLGDIPVVNVCSHDTASAIVS
D39V DPRSQNWNQNILKLFELDSSLLPEIVSEGNVLGRIKEEYGLGDIPVVNVCSHDTASAIVS
Hungary19A-6 DPRSQNWNQNILKLFELDSSLLPEIVSEGNVLGRIKKEYGLGDIPVVNVCSHDTASAIVS
EF3030 DPRSQNWNQNILKLFELDSSLLPEIVSEGNVLGRIKKEYGLGDIPVVNVCSHDTASAIVS
************************************:***********************
TIGR4 VPKTEGSLFISSGTWSLVGVELTSPILTTESFSYGFTNEVGKDGVITFLKNCTGLWIIEE
D39 VPKTEGSLFISSGTWSLVGVELTSPILTTESFSYGFTNEVGKDGVITFLKNCTGLWIIEE
D39V VPKTEGSLFISSGTWSLVGVELTSPILTTESFSYGFTNEVGKDGVITFLKNCTGLWIIEE
Hungary19A-6 VPKTEGSLFISSGTWSLVGVELTSPILTTESFSYGFTNEVGKDGVITFLKNCTGLWIIEE
EF3030 VPKTEGSLFISSGTWSLVGVELTSPILTTESFSYGFTNEVGKDGVITFLKNCTGLWIIEE
************************************************************
TIGR4 LRRSFERRGKAYSFDDIRTMVEKEKENLPLIDTESTEFATESDMHKTLTEYLAYHHETRE
D39 LRRSFERRGKAYSFDDIRTMVEKEKENLPLIDTESTEFATESDMHKTLTEYLAYHHETRE
D39V LRRSFERRGKAYSFDDIRTMVEKEKENLPLIDTESTEFATESDMHKTLTEYLAYHHETRE
Hungary19A-6 LRRSFERRGKAYSFDDIRTMVEKEKENLPLIDTESTEFATESDMHKTLTEYLAYHHETRE
EF3030 LRRSFERRGKAYSFDDIRTMVEKEKENLPLIDTESTEFATESDMHKTLTEYLAYHHETRE
************************************************************
TIGR4 WTDGQLFKIVYESLAETYRKAIELLEELTHKVYKRIYVIGGGARASYFNQMIADRTGKEV
D39 WTDGQLFKIVYESLAETYRKAIELLEELTHKVYKRIYVIGGGARASYFNQMIADRTGKEV
D39V WTDGQLFKIVYESLAETYRKAIELLEELTHKVYKRIYVIGGGARASYFNQMIADRTGKEV
Hungary19A-6 WTDGQLFKIVYESLAETYRKAIELLEELTHKVYKRIYVIGGGARASYFNQMIADRTGKEV
EF3030 WTDGQLFKIVYESLAETYRKAIELLEELTHKVYKRIYVIGGGARASYFNQMIADRTGKEV
************************************************************
TIGR4 LTGLTEATAVGNIVVQLIAMGQLKGMEEAHHVIEEFLQLESYYSQKN
D39 LTGSTEGTAVGNIVVQLIAMGQLKGMEEAHHVIEEFLQLESYYSQKN
D39V LTGSTEGTAVGNIVVQLIAMGQLKGMEEAHHVIEEFLQLESYYSQKN
Hungary19A-6 LTGSTEGTAVGNIVVQLIAMGQLKGMEEAHHVIEEFLQLESYYSQKN
EF3030 LTGSTEATAVGNIVVQLLSQGKINEDTELKDIMTNIAETQYYYPQLS
*** **.**********:: *::: * :.:: :: : : **.* .