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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003860000
- symbol?: adcC
- synonym:
- description?: metal ABC transporter ATP-binding protein
- metal ABC transporter ATP-binding protein
- zinc transport system ATP-binding protein AdcC
- ABC transporter ATP-binding protein
- zinc ABC transporter, ATP-binding protein
- High-affinity zinc uptake system ATP-binding protein
- zinc ABC transporter ATP-binding protein
- ATP-binding protein, Mn
- Zinc ABC transporter, ATP-binding protein ZnuC
- ABC transporter, ATP-binding protein
- ABC transporter ATP-binding domain - Zinc (Zn2+) permease
- ABC transporter family protein
- ABC-type Mn/Zn transport systems, ATPase component
- High-affinity zinc uptake system ATP-binding protein ZnuC
- zinc ABC superfamily ATP binding cassette transporter, ATP-binding protein
- Zinc ABC transporter, ATP-binding protein AdcC
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5014454..5015158
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
D39 MSNSFVKLLVSQLFANLADIFFRVTIIANIYIISKSVIATSLVPILIGISSFVASLLVPL
D39V MSNSFVKLLVSQLFANLADIFFRVTIIANIYIISKSVIATSLVPILIGISSFVASLLVPL
EF3030 MSNSFVKLLVSQLFANLADIFFRVTIIANIYIISKSVIATSLVPILIGISSFVASLLVPL
************************************************************
D39 VTKRLALNRVLSLSQFGKTILLAILVGMFTVMQSVAPLVTYLFVVAISILDGFAAPVSYA
D39V VTKRLALNRVLSLSQFGKTILLAILVGMFTVMQSVAPLVTYLFVVAISILDGFAAPVSYA
EF3030 VTKRLALNRVLSLSQFGKTILLAILVGMFTVMQSVAPLVTYLFVVAISILDGFAAPVSYA
************************************************************
D39 IVPRYATDLGKANSALSMTGEAVQLIGWGLGGLLFATIGLLPTTCINLVLYIISSFLMLF
D39V IVPRYATDLGKANSALSMTGEAVQLIGWGLGGLLFATIGLLPTTCINLVLYIISSFLMLF
EF3030 IVPRYATDLGKANSALSMTGEAVQLIGWGLGGLLFATIGLLPTTFIILVLYIISSFLMLF
******************************************** * *************
D39 LPNAEVEVLESETNLEILLKGWKLVARNPRLRLFVSANLLEIFSNTIWVSSIILVFVTEL
D39V LPNAEVEVLESETNLEILLKGWKLVARNPRLRLFVSANLLEIFSNTIWVSSIILVFVTEL
EF3030 LPNAEVEVLESETNLEILLKGWKLVARNPRLRLFVSANLLEIFSNTIWVSSIILVFVTEL
************************************************************
D39 LNKTESYWGYSNTAYSIGIIISGLIAFRLSEKFLAAKWESILFPLVAMAIVTLTILYFPN
D39V LNKTESYWGYSNTAYSIGIIISGLIAFRLSEKFLAAKWESILFPLVAMAIVTLTILYFPN
EF3030 LNKTESYWGYSNTAYSIGIIISGLIAFRLSEKFLAAKWESILFPLVAMAIVTLTILYFPN
************************************************************
D39 AQMFLLFSALVGMLLQLKEVPESVFLQETVEENHLVNVYSVLEVISTLAFSVFVLLMSYI
D39V AQMFLLFSALVGMLLQLKEVPESVFLQETVEENHLVNVYSVLEVISTLAFSVFVLLMSYI
EF3030 AQMFLLFSALVGMLSQLKEVPESVFLQETVEENHLVNVYSVLEVISTLAFSVFVLLMSYI
************** *********************************************
D39 TESFGISISFWLSAICLMIEAILIYIRRDYFK
D39V TESFGISISFWLSAICLMIEAILIYIRRDYFK
EF3030 TESFGISISFWLSAICLMIEAILIYIRRDYFK
********************************