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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003868000
- symbol?: dltD
- synonym:
- description?: D-alanyl-lipoteichoic acid biosynthesis protein DltD
- D-alanyl-lipoteichoic acid biosynthesis protein DltD
- putative D-alanyl-lipoteichoic acid biosynthesis protein
- D-alanine transfer from undecaprenol-phosphate to the poly
- dltD protein
- Poly(glycerophosphate chain) D-alanine transfer protein DltD
- D-alanine transfer from undecaprenol-phosphate to the poly(glycerophosphate) chain
- D-alanine transfer protein DltD
- DltD central region
- L-fuculose phosphate aldolase
- Protein DltD
- undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine
- undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine transfer protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5142215..5143488
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
SPN034183:
SPN034183_RS10645 (dltD)
SPN994038:
SPN994038_RS10560 (dltD)
SPN994039:
SPN994039_RS10565 (dltD)
⊟Genome Viewer[edit | edit source]
TIGR4 | |
D39 | |
D39V | |
Hungary19A-6 | |
EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MLKRLWMIFGPVLIAGLLVFLLIFFYPTEMHHNLGAEKRSAVATTIDSFKERSQKVRALS
D39 MLKRLWMIFGPVLIAGLLVFLLIFFYPTEMHHNLGAEKRSAVATTIDSFKERSQKVRALS
D39V MLKRLWMIFGPVLIAGLLVFLLIFFYPTEMHHNLGAEKRSAVATTIDSFKERSQKVRALS
Hungary19A-6 MLKRLWMIFGPVLIAGLLVFLLIFFYPTEMHHNLGAEKRSAVATTIDSFKERSQKVRALS
EF3030 MLKRLWMIFGPVLIAGLLVFLLIFFYPTEMHHNLGAEKRSAVATTIDSFKERSQKVRALS
************************************************************
TIGR4 DPNVRFVPFFGSSEWLRFDGAHPAVLAEKYNRSYRPYLLGQGGAASLNQYFGMQQMLPQL
D39 DPNVRFVPFFGSSEWLRFDGAHPAVLAEKYNRSYRPYLLGQGGAASLNQYFGMQQMLPQL
D39V DPNVRFVPFFGSSEWLRFDGAHPAVLAEKYNRSYRPYLLGQGGAASLNQYFGMQQMLPQL
Hungary19A-6 DPNVRFVPFFGSSEWLRFDGAHPAVLAEKYNRSYRPYLLGQGGAASLNQYFGMQQMLPQL
EF3030 DPNVRFVPFFGSSEWLRFDGAHPAVLAEKYNRSYRPYLLGQGGAASLNQYFGMQQMLPQL
************************************************************
TIGR4 ENKQVVYVISPQWFSKNGYDPAAFQQYFNGDQLTSFLKHQSGDQASQYAATRLLQQFPNV
D39 ENKQVVYVISPQWFSKNGYDPAAFQQYFNGDQLTSFLKHQSGDQASQYAATRLLQQFPNV
D39V ENKQVVYVISPQWFSKNGYDPAAFQQYFNGDQLTSFLKHQSGDQASQYAATRLLQQFPNV
Hungary19A-6 ENKQVVYVISPQWFSKNGYDPAAFQQYFNGDQLTSFLKHQSGDQASQYAATRLLQQFPNV
EF3030 ENKQVVYVISPQWFSKNGYDPAAFQQYFNGDQLTSFLKHQSGDQASQYAATRLLQQFPNV
************************************************************
TIGR4 AMKDLVQKLASKEELSTADNEMIELLARFNERQASFFGQFSVRGYVNYDKHVAKYLKILP
D39 AMKDLVQKLASKEELSTADNEMIELLARFNECQASFFGQFSVRGYVNYDKHVAKYLKILP
D39V AMKDLVQKLASKEELSTADNEMIELLARFNECQASFFGQFSVRGYVNYDKHVAKYLKILP
Hungary19A-6 AMKDLVQKLASKEELSTADNEMIELLARFNERQASFFGQFSVRGYVNYDKHVAKYLKILP
EF3030 AMKDLVQKLASKGELSTADNEMIELLARFNERQASFFGQFSVRGYVNYDKHVAKYLKILP
************ ****************** ****************************
TIGR4 DQFSYQAIEDVVKADAEKNTSNNEMGMENYFYNEQIKKDLKKLKDSQKSFTYLKSPEYND
D39 DQFSYQAIEDVVKADAEKNTSNNEMGMENYFYNEQIKKDLKKLKDSQKSFTYLKSPEYND
D39V DQFSYQAIEDVFKADAEKNTSNNEMGMENYFYNEQIKKDLKKLKDSQKSFTYLKSPEYND
Hungary19A-6 DQFSYQAIEDVVKADAEKNTSNNEMGMENYFYNEQIKKDLKKLKDSQKSFTYLKSPEYND
EF3030 DQFSYQAIEDVVKADAEKNTSNNEMGMENYFYNEQIKKDLKKLKDSQKSFTYLKSPEYND
***********.************************************************
TIGR4 LQLVLTQFSKSKVNPIFIIPPVNKKWMNYAGLREDMYQQTVQKIRYQLESQGFTNIADFS
D39 LQLVLTQFSKSKVNPIFIIPPVNKKWMDYAGLREDMYQQTVQKIRYQLESQGFTNIADFS
D39V LQLVLTQFSKSKVNPIFIIPPVNKKWMDYAGLREDMYQQTVQKIRYQLESQGFTNIADFS
Hungary19A-6 LQLVLTQFSKSKVNPIFIIPPVNKKWMDYAGLREDMYQQTVQKIRYQLESQGFTNIADFS
EF3030 LQLVLTQFSKSKVNPIFIIPPVNKKWMDYAGLREDMYQQTVQKIRYQLESQGFTNIADFS
***************************:********************************
TIGR4 KDGGEPFFMKDTIHLGWLGWLAFDKAVDPFLSNPTPAPTYHLNERFFSKDWATYDGDVKE
D39 KDGGEPFFMKDTIHLGWLGWLAFDKAVDPFLSNPTPAPTYHLNERFFSKDWATYDGDVKE
D39V KDGGEPFFMKDTIHLGWLGWLAFDKAVDPFLSNPTPAPTYHLNERFFSKDWATYDGDVKE
Hungary19A-6 KDGGEPFFMKDTIHLGWLGWLAFDKAVDPFLSNPTPAPTYHLNERFFSKDWATYDGDVKE
EF3030 KDGGEPFFMKDTIHLGWLGWLAFDKAVDPFLSNPTPAPTYHLNERFFSKDWATYDGDVKE
************************************************************
TIGR4 FQ
D39 FQ
D39V FQ
Hungary19A-6 FQ
EF3030 FQ
**