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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003930000
- symbol?: yfmH
- synonym:
- description?: EF-P 5-aminopentanol modification-associated protein YfmH
- EF-P 5-aminopentanol modification-associated protein YfmH
- peptidase, M16 family
- putative protease
- insulinase family protein
- peptidase M16
- zinc-dependent protease
- peptidase, M16 family protein
- peptidase M16 inactive domain protein
- putative zinc protease
- Conserved hypothetical protein
- peptidase, M16C (eupitrilysin) subfamily
- peptidase family M16
- Predicted Zn-dependent peptidase
- Putative zinc protease AlbF
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5221262..5222545
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
SPN034183:
SPN034183_RS10890 (yfmH)
SPN994038:
SPN994038_RS10805 (yfmH)
SPN994039:
SPN994039_RS10810 (yfmH)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MTKVVFEEKYYPAVKEMVYRTRLANGLTVALLPKKEFKEVYGSVTVQFGSVDTFVTEVDG
D39 MTKVVFEEKYYPAVKEKVYRTRLANGLTVALLPKKEFKEVYGSVTVQFGSVDTFVTEVDG
D39V MTKVVFEEKYYPAVKEKVYRTRLANGLTVALLPKKEFKEVYGSVTVQFGSVDTFVTEVDG
Hungary19A-6 MTKVVFEEKYYPAVKEKVYRTRLANGLTVALLPKKEFKEVYGSVTVQFGSVDTFVTEVDG
EF3030 MTKVVFEEKYYPAVKEKVYRTRLANGLTVALLPKKEFKEVYGSVTVQFGSVDTFVTEVDG
**************** *******************************************
TIGR4 DVKQYPGGIAHFLEHKLFEREDSSDLMSAFTSLGADSNAFTSFTKTNYLFSATDYFLENL
D39 YVKQYPGGIAHFLEHKLFEREDSSDLMSAFTSLGADSNAFTSFTKTNYLFSATDYFLENL
D39V YVKQYPGGIAHFLEHKLFEREDSSDLMSAFTSLGADSNAFTSFTKTNYLFSATDYFLENL
Hungary19A-6 DVKQYPGGIAHFLEHKLFEREDSSDFMSAFTSLGADSNAFTSFTKTNYLFSATDYFLENL
EF3030 DVKQCPGGIAHFLEHKLFEREDSSDLMSAFTSLGADSNAFTSFTKTNYLFSATDYFLENL
*** ********************:**********************************
TIGR4 DLLDELVTSAHFTEASILTEQDIIQQEREMYQDDPDSCLFFSTLANLYPGTPLATDIVGS
D39 DLLDELVTSAHFTEASILTEQDIIQQEREMYQDDPDSCLFFSTLANLYPGTPLATDIVGS
D39V DLLDELVTSAHFTEASILTEQDIIQQEREMYQDDPDSCLFFSTLANLYPGTPLATDIVGS
Hungary19A-6 DLLDELVTSAHFTEASILTEQDIIQQEREMYQDDPDSCLFFSTLANLYPGTPLATDIVGS
EF3030 DLLDELVTSAHFTEASILTEQDIIQQEREMYQDDPDSCLFFSTLANLYPGTPLATDIVGS
************************************************************
TIGR4 EESISQINLTNLQENFTKFYKPVNMSLFLVGNFDVERVQDYFESKELKDSDFQEVAREKL
D39 EESISQINLTNLQENFTKFYKPVNMSLFLVGNFDVERVQDYFESKELKDSDFQEVAREKL
D39V EESISQINLTNLQENFTKFYKPVNMSLFLVGNFDVERVQDYFESKELKDSDFQEVAREKL
Hungary19A-6 EESISQINLTNLQENFTKFYKPVNMSLFLVGNFDVERVQDYFESKELKDSDFQEVAREKL
EF3030 EESISQINLTNLQENFTKFYKPVNMSLFLVGNFDVERVQDYFESKELKDSDFQEVAREKL
************************************************************
TIGR4 FLQPVKPTDSMRMEVSSPKLAIGVRGKREVSEADCYRHHILLKLLFAMMFGWTSDRFQKC
D39 FLQPVKPTDSMRMEVSSPKLAIGVRGKREVSEADCYRHHILLKLLFAMMFGWTSDRFQKC
D39V FLQPVKPTDSMRMEVSSPKLAIGVRGKREVSEADCYRHHILLKLLFAMMFGWTSDRFQKC
Hungary19A-6 FLQPVKPTDSMRMEVSSPKLAIGVRGKREVSEADCYRHHILLKLLFAMMFGWTSDRFQKC
EF3030 FLQPVKPTDSMRMEVSSPKLAIGVRGKREVSEADCYRHHILLKLLFAMMFGWTSDRFQKC
************************************************************
TIGR4 YESGKIDASLSLEVEITSRFHFVMLTMDTKEPVALSHQFRKAIRNFTKDLDITEEHLDII
D39 YESGKIDASLSLEVEITSRFHFVMLTIDTKEPVALSHQFRKAIRNFTKDLDITEEHLDII
D39V YESGKIDASLSLEVEITSRFHFVMLTIDTKEPVALSHQFRKAIRNFTKDLDITEEHLDII
Hungary19A-6 YESGKIDASLSLEVEVTSRFHFVMLTMDTKEPVALSHQFRKAIRNFTKDLDITEEHLDII
EF3030 YESGKIDASLSLEVEVTSRFHFVMLTMDTKEPVALSHQFRKAIRNFTKDLDITEEHLDII
***************:**********:*********************************
TIGR4 KREMFGEFFSSMNSLEFIATQYDAFENGEIIFDLPKILQEITLEDVLDAGHHLIDDGDIV
D39 KREMFGEFFSSMNSLEFIATQYDAFENGETIFDLPKILQEITLEDVLDAGHHLIDDGDIV
D39V KREMFGEFFSSMNSLEFIATQYDAFENGETIFDLPKILQEITLEDVLDAGHHLIDDGDIV
Hungary19A-6 KREMFGEFFSSMNSLEFIATQYDAFENGETIFDLPKILQEITLEDVLDAGHHLIDDGDIV
EF3030 KREMFGEFFSSMNSLEFIATQYDAFENGETIFDLPKILQEITLEDVLDAGHHLIDDGDIV
***************************** ******************************
TIGR4 DFTIFPS
D39 DFTIFPS
D39V DFTIFPS
Hungary19A-6 DFTIFPS
EF3030 DFTIFPS
*******