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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 15-OCT-2021

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae 70585
  • locus tag: SP70585_RS05615 [old locus tag: SP70585_1130 ]
  • pan locus tag?: PNEUPAN002052000
  • symbol: SP70585_RS05615
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SP70585_RS05615 [old locus tag: SP70585_1130 ]
  • symbol: SP70585_RS05615
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1032343..1033500
  • length: 1158
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGAGAGGGTTTAATAACAAGATAAAGTCTGTTTATCAAGAACTAACAAATTCCAAAGAG
    AAATTCGGTAGCTTTCACAAGACTTTAATTCATTTGCATACACCTGTTTCTTATGATTAC
    AAGCTATTTTCTAATTGGACTGCAACGAAATATAGAAAAATTACTGAAGATGAACTATAT
    GATATATTTTTTGAAAATAAGAAAATAAAAGTTGATAAGACAATTTTTTTTAGTAATTTT
    GATAAGGTTGTTTTTTCTAGTTCAAAAGAATATATTAGTTTTCTTATGTTAGCAGAGGCA
    ATCATAAAAAATGGAATAGAAATAGTTGTAGTAACTGATCATAATACTACCAAAGGTATT
    AAAAAGTTACAAATGGCAGTCTCAATCATAATGAAAAATTATCCGATTTATGATATACAT
    CCTCATATTTTACATGGAGTAGAAATTAGTGCAGCAGATAAATTGCATATTGTATGTATA
    TATGATTATGAACAAGAATCATGGGTTAATCAATGGTTAAGTGAAAATATTATAAGTGAG
    AAAGATGGAAGTTATCAACATTTACTGACTATAATGAAGGATTTCAATAATCAAAAAATA
    GTTAACTATATTGCTCATTTCAATAGTTATGACATTTTGAAAAAAGGTTCTCACTTATTA
    GGTGCATATAAACGAAAAATTTTTTCTAAAGAAAATACACGATTTTTGGAGTTTAATATT
    AACTCGAAAGAATCTTCGCAACAACTTGATATTCTCTATAAAGAAGTTGGTGTATTAAGT
    TTGGGACAAAAAGTTGTAGCCATGCTTAATTTTTTATTAGCATATAGTGACTATTCTAAA
    GACTTCAGACCATTGATTATTGATCAGCCTGAAGACAACCTAGACAATCGTTATATTTAC
    AGGCATTTAGTTCAGCAGTTTAGAGATGTGAAAGCTCAACGTCAAATTATTTTAGCAACA
    CATAATGCTACAATTGTAACAAATTCTATGACAGATCAAGTTGTTATTATGGAGTCAGAT
    GGAGTTAACGGATGGATTGAATCACAGGGATATGTTAGTGAAAAATATATAAAAAATCAT
    ATCATCAATCAATTAGAGGGAGGAAAAAATTCTTTCAAGCATAAAATGTCTATATATGAG
    ACGGCTTTATCAGAGTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1158

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SP70585_RS05615 [old locus tag: SP70585_1130 ]
  • symbol: SP70585_RS05615
  • description: hypothetical protein
  • length: 385
  • theoretical pI: 8.64174
  • theoretical MW: 44943.1
  • GRAVY: -0.342338

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Cations and iron carrying compounds nickel import ATP-binding protein NikD (TIGR02770; HMM-score: 13.5)
    Cellular processes Cellular processes Cell division cell division ATP-binding protein FtsE (TIGR02673; HMM-score: 13)
  • TheSEED: see SP70585_1130
  • PFAM:
    P-loop_NTPase (CL0023) SMC_N; RecF/RecN/SMC N terminal domain (PF02463; HMM-score: 26.1)
    AAA_21; AAA domain, putative AbiEii toxin, Type IV TA system (PF13304; HMM-score: 23.2)
    and 1 more
    no clan defined Post_transc_reg; Post-transcriptional regulator (PF13797; HMM-score: 13.6)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003614
    • TAT(Tat/SPI): 0.000268
    • LIPO(Sec/SPII): 0.001123
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MRGFNNKIKSVYQELTNSKEKFGSFHKTLIHLHTPVSYDYKLFSNWTATKYRKITEDELYDIFFENKKIKVDKTIFFSNFDKVVFSSSKEYISFLMLAEAIIKNGIEIVVVTDHNTTKGIKKLQMAVSIIMKNYPIYDIHPHILHGVEISAADKLHIVCIYDYEQESWVNQWLSENIISEKDGSYQHLLTIMKDFNNQKIVNYIAHFNSYDILKKGSHLLGAYKRKIFSKENTRFLEFNINSKESSQQLDILYKEVGVLSLGQKVVAMLNFLLAYSDYSKDFRPLIIDQPEDNLDNRYIYRHLVQQFRDVKAQRQIILATHNATIVTNSMTDQVVIMESDGVNGWIESQGYVSEKYIKNHIINQLEGGKNSFKHKMSIYETALSE

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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