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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 17-JAN-2018
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae AP200
- locus tag: SPAP_0676 [new locus tag: SPAP_RS03350 ]
- pan locus tag?: PNEUPAN001604000
- symbol: SPAP_0676
- pan gene symbol?: murG
- synonym:
- product: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPAP_0676 [new locus tag: SPAP_RS03350 ]
- symbol: SPAP_0676
- product: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
- replicon: chromosome
- strand: +
- coordinates: 649753..650811
- length: 1059
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: CP002121 (649753..650811) NCBI
- BioCyc: see SPAP_RS03350
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0599 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1021ATGAAAAAAATTGTCTTTACAGGTGGGGGGACGGTTGGACACGTTACCCTCAATCTTTTG
TTAATGCCCAAGTTCATCGAAGATGGTTGGGAAGTCCACTATATCGGGGACAAGCGTGGT
ATCGAACACCAAGAAATCCTTAAGTCAGGTTTGGATGTCACTTTCCACTCCATTGCGACT
GGGAAATTGCGTCGCTATTTCTCTTGGCAAAATATGCTGGACGTCTTCAAAGTTGGCTGG
GGAATCGTCCAATCGCTCTTTATCATGTTGCGACTTCGTCCACAGACCCTTTTTTCAAAG
GGAGGCTTTGTCTCAGTACCGCCTGTTATCGCTGCGCGTGTGTCAGGAGTGCCTGTCTTT
ATTCACGAATCTGACCTGTCTATGGGCTTGGCCAATAAAATCGCCTATAAATTTGCGACT
AAGATGTATTCAACCTTTGAACAAGCTTCGAGTTTGGCTAAGGTCGAGCATGTGGGAGCG
GTGACCAAGGTTTCGGACAAAAACACTCCAGAACCAGATGAATTGGTGGATATTCAAACC
CACTTTAATCCCAAATTGCCAACTGTATTGTTTGTCGGCGGTTCTGCAGGCGCTCGTGTC
TTTAACCAATTGGTGACAGACCATAAGAAAGAACTAACAGAGCGCTACAATATTATCAAT
TTAACTGGAGATTCTAGCCTGAATGAGTTGAGGCAAAATCTTTTTCGTGTTGACTATGTG
ACCGATCTCTATCAACCCTTGATGGAATTGGCTGATATTGTTGTGACACGAGGTGGTGCC
AATACGATTTTTGAGCTCTTGGCGATAGCAAAATTGCATGTCATTGTGCCGCTTGGTCGT
GAAGCTAGTCGTGGTGACCAGATTGAAAATGCAGCTTACTTTGTAAAAAAAGGCTATGCA
GAAGACCTTCAAGAAAGCGATTTGACCTTGGATAGTTTGGAAGAGAAGCTTTCTCACTTA
CTAAGTCACAAGGAAGATTACCAAGCTAAGATGAAAGCTTCTAAGGAATTGAAATCTCTA
GCAGATTTTTATCAATTGTTGAAAAAAGATTTATCATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPAP_0676 [new locus tag: SPAP_RS03350 ]
- symbol: SPAP_0676
- description: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
- length: 352
- theoretical pI: 7.45864
- theoretical MW: 39434.2
- GRAVY: -0.0977273
⊟Function[edit | edit source]
- TIGRFAM: Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (TIGR01133; EC 2.4.1.227; HMM-score: 201.4)and 2 moreHypothetical proteins Conserved conserved hypothetical protein (TIGR00661; HMM-score: 29.1)Cellular processes Toxin production and resistance glycosyltransferase, MGT family (TIGR01426; EC 2.4.1.-; HMM-score: 21.9)
- TheSEED :
- UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227)
- PFAM: GT-B (CL0113) Glyco_transf_28; Glycosyltransferase family 28 N-terminal domain (PF03033; HMM-score: 146)Glyco_tran_28_C; Glycosyltransferase family 28 C-terminal domain (PF04101; HMM-score: 123.3)and 1 moreUDPGT; UDP-glucoronosyl and UDP-glucosyl transferase (PF00201; HMM-score: 14.3)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 1.05
- Cytoplasmic Membrane Score: 8.78
- Cellwall Score: 0.08
- Extracellular Score: 0.09
- Internal Helices: 0
- DeepLocPro: Cytoplasmic Membrane
- Cytoplasmic Score: 0.0356
- Cytoplasmic Membrane Score: 0.929
- Cell wall & surface Score: 0.0006
- Extracellular Score: 0.0348
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.041869
- TAT(Tat/SPI): 0.000374
- LIPO(Sec/SPII): 0.00515
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ADM84269 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKKIVFTGGGTVGHVTLNLLLMPKFIEDGWEVHYIGDKRGIEHQEILKSGLDVTFHSIATGKLRRYFSWQNMLDVFKVGWGIVQSLFIMLRLRPQTLFSKGGFVSVPPVIAARVSGVPVFIHESDLSMGLANKIAYKFATKMYSTFEQASSLAKVEHVGAVTKVSDKNTPEPDELVDIQTHFNPKLPTVLFVGGSAGARVFNQLVTDHKKELTERYNIINLTGDSSLNELRQNLFRVDYVTDLYQPLMELADIVVTRGGANTIFELLAIAKLHVIVPLGREASRGDQIENAAYFVKKGYAEDLQESDLTLDSLEEKLSHLLSHKEDYQAKMKASKELKSLADFYQLLKKDLS
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0599 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]