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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 17-JAN-2018
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae AP200
- locus tag: SPAP_1680 [new locus tag: SPAP_RS08315 ]
- pan locus tag?: PNEUPAN003072000
- symbol: SPAP_1680
- pan gene symbol?: nanK
- synonym:
- product: Transcriptional regulator/sugar kinase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPAP_1680 [new locus tag: SPAP_RS08315 ]
- symbol: SPAP_1680
- product: Transcriptional regulator/sugar kinase
- replicon: chromosome
- strand: -
- coordinates: 1584493..1585377
- length: 885
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP002121 (1584493..1585377) NCBI
- BioCyc: see SPAP_RS08315
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1488 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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841ATGACATATTACGTTGCAATTGATATCGGTGGAACCAACATCAAGTATGGTTTGGTTGAT
CAAGAGGGGCAACTTCTTGAATCGCATGAAATGCCAACTGAGGCGCATAAGGGTGGACCT
CATATCTTACAAAAGACCAAAGATATCGTAGCTAGTTATTTAGAAAAAGGCCCAGTAGCA
GGTGTTGCCATATCTTCTGCTGGGATGGTGGATCCGGATAAGGGTGAGATTTTCTATGCT
GGGCCGCAAATCCCTAACTACGCAGGCACCCAGTTCAAAAAGGAAATCGAAGAAAGCTTT
ACTATTCCTTGTGAGATTGAAAATGATGTCAACTGTGCAGGTCTTGCTGAGGCAGTATCT
GGTTCAGGCAAGGGAGCAAGTGTGACACTTTGCTTGACCATTGGAACAGGTATCGGTGGT
TGCTTGATTATGGATAGGAAAGTCTTCCATGGTTTTAGCAATTCAGCCTGTGAAGTCGGG
TATATGCATATGCAGGATGGAGCTTTTCAGGATCTCGCTTCTACAACAGCTTTAGTGAAA
TATGTAGCTGAAGCCCATGGAGAAGATGTTGATCAGTGGAATGGCCGACGTATCTTTAAG
GAAGCTACTGAAGGAAACAAAATCTGCATGGAAGGCATTGACCGTATGGTTGACTATCTA
GGAAAAGGTCTGGCAAATATTTGCTACGTTGCCAATCCAGAAGTGGTTATTCTTGGTGGT
GGTATCATGGGGCAAGAGGCTATCCTCAAACCTAAGATCCGCACAGCCTTGAAAGAGGCT
TTGGTACCAAGTTTAGCAGAAAAAACACGATTAGAATTTGCCCATCACCAAAATACAGCA
GGGATGTTGGGTGCATATTATCATTTTAAGACAAAACAATCCTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPAP_1680 [new locus tag: SPAP_RS08315 ]
- symbol: SPAP_1680
- description: Transcriptional regulator/sugar kinase
- length: 294
- theoretical pI: 5.36749
- theoretical MW: 31615.9
- GRAVY: -0.117347
⊟Function[edit | edit source]
- TIGRFAM: Unknown function General ROK family protein (putative glucokinase) (TIGR00744; HMM-score: 163.7)
- TheSEED :
- N-acetylmannosamine kinase (EC 2.7.1.60)
- PFAM: Actin_ATPase (CL0108) ROK; ROK family (PF00480; HMM-score: 182.5)and 3 moreFGGY_N; FGGY family of carbohydrate kinases, N-terminal domain (PF00370; HMM-score: 20.8)Glucokinase; Glucokinase (PF02685; HMM-score: 19.9)Pan_kinase; Type III pantothenate kinase (PF03309; HMM-score: 15.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.97
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 0.01
- Extracellular Score: 0.02
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.006893
- TAT(Tat/SPI): 0.000211
- LIPO(Sec/SPII): 0.000644
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ADM85264 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MTYYVAIDIGGTNIKYGLVDQEGQLLESHEMPTEAHKGGPHILQKTKDIVASYLEKGPVAGVAISSAGMVDPDKGEIFYAGPQIPNYAGTQFKKEIEESFTIPCEIENDVNCAGLAEAVSGSGKGASVTLCLTIGTGIGGCLIMDRKVFHGFSNSACEVGYMHMQDGAFQDLASTTALVKYVAEAHGEDVDQWNGRRIFKEATEGNKICMEGIDRMVDYLGKGLANICYVANPEVVILGGGIMGQEAILKPKIRTALKEALVPSLAEKTRLEFAHHQNTAGMLGAYYHFKTKQS
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1488 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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