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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 22-FEB-2023

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae AP200
  • locus tag: SPAP_RS01870 [old locus tag: SPAP_0378 ]
  • pan locus tag?: PNEUPAN001127000
  • symbol: SPAP_RS01870
  • pan gene symbol?: cps2E
  • synonym:
  • product: sugar transferase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPAP_RS01870 [old locus tag: SPAP_0378 ]
  • symbol: SPAP_RS01870
  • product: sugar transferase
  • replicon: chromosome
  • strand: +
  • coordinates: 346961..348322
  • length: 1362
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_014494 (346961..348322) NCBI
  • BioCyc: SPAP_RS01870 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_0319 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGAGTGAAAAACTAGCAAAGCCTTCAGTAGCCATAGTCCAGAGTTTTCTTGTTATTTTA
    TTGACTTATCTACTTAGCGCTGTGAGAGAAACAGAGATTGTTTCAACAACAGCTATTGTA
    CTTTATATCCTCCACTATTTTGTCTTTTATATCAGTGATTATGGACGGAATTTCTTTAAA
    AGGGGATATTTGATTGAACTTGTCCAGACATTGAAATATATCCTATTCTTTGCGCTAGCG
    ATTAGTATTTCTAATTTTTTCTTAGAAGATCGATTTAGTATTTCCAGAAGAGGCATGATT
    TACTTCCTCTTATTACATGTTTTCTTAGTCTATGTGCTAAACCTATTTATCAAGTGGTAT
    TGGAAGCGGGCTTATCCCAACTTTAAAGGAAGTAAGAAGGTTTTCCTACTTACAGCAACT
    TCTCATGTCGAAAAGGTACTGGATAGATTAATAGAATCAAATGAGGTTGTTGGGGAGTTG
    GTAGCCGTCAGTGTTTTAGATAAACCAGATTTTCAGCATGATTATTTAAAGGTTGTAGCA
    GAGGGGGAGATAGTAAACTTTGCGACTCATGAGGTGGTCGATGAAGTCTTTATCAATCTT
    CCAAGTGAAAAATACAATATTGGAGAGCTTGTCTCTCAGTTTGAAACGATGGGAATTGAT
    GTAACAGTCAATCTAAATGCTTTCGATTGGGCACGTAACAAGCAAATTCGTGAGATGGCA
    GGACTAAATGTTGTGACTTTTTCTACAACATTTTATAAGACTAGCCATGTGATTGCTAAG
    TGGATTATTGATATTGTCGGTTCCCTGGTAGGTTTGATATTATGTGGTCTAGTCAGTATT
    GTGCTGGTTCCTTTGATTCGAAAGGATGGGGGTTCTGCTTTTTTTGCTCAGACGCGTATA
    GGAAAAAATGGCCGCCATTTCACTTTTTATAAGTTTCGCTCTATGTGTGTAGATGCTGAG
    GATAAAAAGAGAGAACTCATGGAACAAAATACCATGCAGGGTGGAATGTTTAAGGTGGAC
    GATGATCCTCGTATCACGAAAATTGGTCATTTTATACGGAAGACGAGCTTGGACGAGCTA
    CCACAGTTTTATAATGTTCTAAAGGGAGATATGAGTTTGGTAGGTACACGACCACCAACA
    GTGGACGAGTATGAACACTATACCCCAGAACAAAAACGTCGGCTAAGTTTTAAACCTGGT
    ATAACAGGCTTATGGCAGGTCAGTGGACGAAGTGAGATCAAGAATTTCGATGAAGTTGTC
    AAGTTAGATGTGGCCTATATAGACGATTGGACAATCTGGAAAGATATTGAGATTTTATTG
    AAGACAGTTAAAGTTGTATTGATGAAGGATGGAGCGAAATAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1362

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPAP_RS01870 [old locus tag: SPAP_0378 ]
  • symbol: SPAP_RS01870
  • description: sugar transferase
  • length: 453
  • theoretical pI: 8.76621
  • theoretical MW: 52178.5
  • GRAVY: 0.144592

⊟Function[edit | edit source]

  • reaction:
    EC 2.7.8.-?  ExPASy
  • TIGRFAM:
    exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (TIGR03025; HMM-score: 393.3)
    and 3 more
    undecaprenyl-phosphate galactose phosphotransferase WbaP (TIGR03022; EC 2.7.8.6; HMM-score: 282.4)
    undecaprenyl-phosphate glucose phosphotransferase (TIGR03023; EC 2.7.8.-; HMM-score: 271.8)
    sugar transferase, PEP-CTERM system associated (TIGR03013; HMM-score: 167.4)
  • TheSEED: see SPAP_0378
  • PFAM:
    no clan defined Bac_transf; Bacterial sugar transferase (PF02397; HMM-score: 219.2)
    and 1 more
    NADP_Rossmann (CL0063) CoA_binding_3; CoA-binding domain (PF13727; HMM-score: 29.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 5
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.0002
    • Cytoplasmic Membrane Score: 0.9989
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0009
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.027713
    • TAT(Tat/SPI): 0.000636
    • LIPO(Sec/SPII): 0.064767
  • predicted transmembrane helices (TMHMM): 5

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_001291063 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MSEKLAKPSVAIVQSFLVILLTYLLSAVRETEIVSTTAIVLYILHYFVFYISDYGRNFFKRGYLIELVQTLKYILFFALAISISNFFLEDRFSISRRGMIYFLLLHVFLVYVLNLFIKWYWKRAYPNFKGSKKVFLLTATSHVEKVLDRLIESNEVVGELVAVSVLDKPDFQHDYLKVVAEGEIVNFATHEVVDEVFINLPSEKYNIGELVSQFETMGIDVTVNLNAFDWARNKQIREMAGLNVVTFSTTFYKTSHVIAKWIIDIVGSLVGLILCGLVSIVLVPLIRKDGGSAFFAQTRIGKNGRHFTFYKFRSMCVDAEDKKRELMEQNTMQGGMFKVDDDPRITKIGHFIRKTSLDELPQFYNVLKGDMSLVGTRPPTVDEYEHYTPEQKRRLSFKPGITGLWQVSGRSEIKNFDEVVKLDVAYIDDWTIWKDIEILLKTVKVVLMKDGAK

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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