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serotype 4
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EF3030
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INV200
serotype 14
JJA
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MDRSPN001
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NCTC7465
serotype 1
NCTC7466
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NU83127
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SP49
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SPN032672
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SPN034183
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SPN994038
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SPNA45
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Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 05-APR-2025

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae JJA
  • locus tag: SPJ_RS01715 [old locus tag: SPJ_0339 ]
  • pan locus tag?: PNEUPAN001127000
  • symbol: SPJ_RS01715
  • pan gene symbol?: cps2E
  • synonym:
  • product: sugar transferase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPJ_RS01715 [old locus tag: SPJ_0339 ]
  • symbol: SPJ_RS01715
  • product: sugar transferase
  • replicon: chromosome
  • strand: +
  • coordinates: 316362..317729
  • length: 1368
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGATAAAAAAGGATTGGAAATTTTTCTGGCAGTATTACAGAGTATTATTGTCATTTTA
    TTGGTTTATTTTCTTAGCTTTGTTAGAGAGACAGAACTTGAACGTTCTTCGATGGTTATA
    CTATACCTTCTCCACTTTTTTGTATTCTATTTTAGTTCCTATGGTAACAAATTTTTTAAA
    AGAGGGTACCTAGTTGAGTTTAATAGTACTATAAGATATATTTTTTTCTTTGCAATAGCT
    ATAAGTGTATTAAACTTTTTTATAGCGGAACGGTTTAGTATCTCTAGAAGAGGAATGGTA
    TACTTCTTAACTTTAGAAGGAATATCCTTATACTTGTTAAATTTCTTAGTAAAGAAATAT
    TGGAAGCATGTGTTTTTTAATCCAAAAAATAGCAAGAAAATTTTACTGTTAACAGTAACG
    GAAAATATAGAAAAAGTTCTTGATAAATTGCTAGAATCTGATGAACTTTCATGGAAACTG
    GTAGCAGTAAGTGTTTTGGATAAATCTGATTTTCAACATGATAAAATACCTGTAATTGAA
    AAGGAAAAAATTATTGAATTTGCAACGCATGAAGTTGTGGATGAGGTGTTTGTCGATCTT
    CCAKGAGAGAGCTATGATATTGGAGAAATTATCTCTAAGTTTGAGACAATGGGGATAGAT
    GTAACTGTAAATCTTAATGCATTTAATAAGAATTTGGGTCGTAATAAACAAATTCATGAG
    ATAGTAGGATTGAATGTAGTCACTTTCTCTACAAATTTTTATAAAACTAGTCATGTGATT
    TCAAAGAGAATTCTCGATATTTGTGGTGCCACTATTGGCCTTATTCTTTTTGCTATAGCT
    AGTCTAGTTTTAGTTCCATTGATTCGTAAAGATGGCGGACCAGCTATTTTTGCTCAAACT
    CGTATAGGGAAAAATGGTCGACATTTTACCTTTTATAAATTCCGTTCGATGCGGATCGAT
    GCTGAAGCTATCAAAGAACAGTTGATGGATCAAAATACGATGCGAGGTGGTATGTTTAAG
    ATGGACAATGATCCTCGTGTTACAAAAATTGGTCGCTTTATTCGTAAAACCAGTTTAGAT
    GAGTTACCCCAGTTTTGGAATGTCTTTATAGGAGATATGAGTTTGGTGGGAACACGTCCA
    CCTACAGTAGACGAGTATGATCAGTATACTCCAGAACAGAAACGTCGACTCAGCTTTAAA
    CCTGGTATTACAGGTTTATGGCAGGTTAGCGGCCGTAGTAAAATAACCGATTTTGACGAT
    GTTGTAAAATTAGATGTGGCTTATATTGATAATTGGACAATCTGGAAAGATATTGAAATT
    TTGCTTAAAACTGTTAAAGTTGTATTTATGAGAAATGGAGCGAAGTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1368

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPJ_RS01715 [old locus tag: SPJ_0339 ]
  • symbol: SPJ_RS01715
  • description: sugar transferase
  • length: 455
  • theoretical pI: 9.62909
  • theoretical MW: 52665.3
  • GRAVY: 0.118282

⊟Function[edit | edit source]

  • reaction:
    EC 2.7.8.-?  ExPASy
  • TIGRFAM:
    exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (TIGR03025; HMM-score: 398.4)
    and 3 more
    undecaprenyl-phosphate galactose phosphotransferase WbaP (TIGR03022; EC 2.7.8.6; HMM-score: 302.2)
    undecaprenyl-phosphate glucose phosphotransferase (TIGR03023; EC 2.7.8.-; HMM-score: 280.8)
    sugar transferase, PEP-CTERM system associated (TIGR03013; HMM-score: 169.2)
  • TheSEED: see SPJ_0339
  • PFAM:
    no clan defined Bac_transf; Bacterial sugar transferase (PF02397; HMM-score: 222.8)
    and 2 more
    NADP_Rossmann (CL0063) CoA_binding_3; CoA-binding domain (PF13727; HMM-score: 33)
    CPA_AT (CL0064) LrgB; LrgB-like family (PF04172; HMM-score: 11.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 5
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.0001
    • Cytoplasmic Membrane Score: 0.9993
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0007
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.007374
    • TAT(Tat/SPI): 0.00046
    • LIPO(Sec/SPII): 0.003654
  • predicted transmembrane helices (TMHMM): 5

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MDKKGLEIFLAVLQSIIVILLVYFLSFVRETELERSSMVILYLLHFFVFYFSSYGNKFFKRGYLVEFNSTIRYIFFFAIAISVLNFFIAERFSISRRGMVYFLTLEGISLYLLNFLVKKYWKHVFFNPKNSKKILLLTVTENIEKVLDKLLESDELSWKLVAVSVLDKSDFQHDKIPVIEKEKIIEFATHEVVDEVFVDLPXESYDIGEIISKFETMGIDVTVNLNAFNKNLGRNKQIHEIVGLNVVTFSTNFYKTSHVISKRILDICGATIGLILFAIASLVLVPLIRKDGGPAIFAQTRIGKNGRHFTFYKFRSMRIDAEAIKEQLMDQNTMRGGMFKMDNDPRVTKIGRFIRKTSLDELPQFWNVFIGDMSLVGTRPPTVDEYDQYTPEQKRRLSFKPGITGLWQVSGRSKITDFDDVVKLDVAYIDNWTIWKDIEILLKTVKVVFMRNGAK

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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