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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 30-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae CGSP14
- locus tag: SPCG_1469 [new locus tag: SPCG_RS07600 ]
- pan locus tag?: PNEUPAN002766000
- symbol: mocA
- pan gene symbol?: mocA
- synonym:
- product: oxidoreductase, Gfo/Idh/MocA family
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPCG_1469 [new locus tag: SPCG_RS07600 ]
- symbol: mocA
- product: oxidoreductase, Gfo/Idh/MocA family
- replicon: chromosome
- strand: +
- coordinates: 1444771..1445853
- length: 1083
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP001033 (1444771..1445853) NCBI
- BioCyc: see SPCG_RS07600
- MicrobesOnline: 5760803 MicrobesOnline
- PneumoBrowse for strain D39V: SPV_1311 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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121
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421
481
541
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961
1021
1081ATGTCTGAGAATCCTCCTTTTCCTCCTTTTTCTCCTCTCTGTTGGATAGTCCCGTCTATC
TATGTTATAATAAAAGAAGGATTTAAAATCGGAAAAGGAGTATTTATGCTAAAATTAGGT
GTCATCGGAACTGGCGCTATCAGCCATCATTTCATAGAAGCAGCCCATACCAGTGGAGAA
TACCAACTGGTCGCAATCTATTCTAGAAAACTAGAAACTGCAGCAACCTTTGCTTCTCGC
TATCAGAATATCCAACTATTCGATCAATTAGAAGTCTTCTTCAAATCTTCTTTTGATTTA
GTCTATATCGCCAGTCCAAACTCCTTACATTTTGCTCAGGCAAAAGCTGCCTTGTCTGCT
GGTAAACATGTTATTCTCGAAAAGCCAGCTGTCACTCAACCACAAGAATGGTTTGATTTG
ATTCAAACAGCTGAAAAAAATAACTGTTTTATCTTTGAAGCAGCTCGTAATTACCACGAG
AAAGCCTTTACTACTATCAAAAACTTTTTAGCAGATAAGCAAGTGTTAGGAGCAGATTTC
AACTATGCCAAATACTCTTCCAAGATGCCTGACTTGTTGACTGGACAAACACCAAATGTC
TTTTCAGACCGTTTTGCTGGTGGAGCCCTCATGGATTTGGGGATTTATCCCCTCTATGCT
GCTGTTCGTCTTTTTGAAAAAGCTAATGACGCGACTTACCATGCTCAACAGCTTGACAAT
AGCATTGACCTAAATGGAGATGGTATCCTCTTCTACCCAGACTATCAAGTTCACATCAAG
GCTGGAAAAAACATCACTTCCAATCTTCCTTGCGAGATTTATACAACAGATGGAACCTTG
ACTCTCAACACGATTGAGCATATTCGCTCAGCTATTTTTACCGACCACCAAGGAAATCAA
GTCCAGCTTCCTATCCAACAGGCTCCTCATACGATGACTGAGGAAGTCGCTGCATTTGCA
CACATGATCCAGCAACCAGATCTGAATCTCTACCAAACTTGGCTGTATGATGCAGGCTCT
GTTCATGAGCTACTATATACCATGCGCCAGACTGCTGGCATTAGATTTGAGGCAGAAAAA
TGA60
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1083
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPCG_1469 [new locus tag: SPCG_RS07600 ]
- symbol: MocA
- description: oxidoreductase, Gfo/Idh/MocA family
- length: 360
- theoretical pI: 6.18266
- theoretical MW: 40410.7
- GRAVY: -0.112778
⊟Function[edit | edit source]
- TIGRFAM: Energy metabolism Sugars inositol 2-dehydrogenase (TIGR04380; EC 1.1.1.18; HMM-score: 49.1)and 1 moreBiosynthesis of cofactors, prosthetic groups, and carriers Menaquinone and ubiquinone o-succinylbenzoate synthase (TIGR01927; EC 4.2.1.113; HMM-score: 11.3)
- TheSEED :
- oxidoreductase, Gfo/Idh/MocA family
- PFAM: NADP_Rossmann (CL0063) GFO_IDH_MocA; Oxidoreductase family, NAD-binding Rossmann fold (PF01408; HMM-score: 84.1)and 5 moreNAD_binding_3; Homoserine dehydrogenase, NAD binding domain (PF03447; HMM-score: 23.4)F420_oxidored; NADP oxidoreductase coenzyme F420-dependent (PF03807; HMM-score: 20.1)Sacchrp_dh_NADP; Saccharopine dehydrogenase NADP binding domain (PF03435; HMM-score: 18.6)Semialdhyde_dh; Semialdehyde dehydrogenase, NAD binding domain (PF01118; HMM-score: 18.4)DapB_N; Dihydrodipicolinate reductase, N-terminus (PF01113; HMM-score: 14.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.9894
- Cytoplasmic Membrane Score: 0.0008
- Cell wall & surface Score: 0.0002
- Extracellular Score: 0.0095
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.023749
- TAT(Tat/SPI): 0.006943
- LIPO(Sec/SPII): 0.000508
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ACB90721 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MSENPPFPPFSPLCWIVPSIYVIIKEGFKIGKGVFMLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVTQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLADKQVLGADFNYAKYSSKMPDLLTGQTPNVFSDRFAGGALMDLGIYPLYAAVRLFEKANDATYHAQQLDNSIDLNGDGILFYPDYQVHIKAGKNITSNLPCEIYTTDGTLTLNTIEHIRSAIFTDHQGNQVQLPIQQAPHTMTEEVAAFAHMIQQPDLNLYQTWLYDAGSVHELLYTMRQTAGIRFEAEK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1311 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]