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serotype 4
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serotype 19A
Hu17
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INV200
serotype 14
JJA
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MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
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R6
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SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
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SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 30-JAN-2014

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae G54
  • locus tag: SPG_0893 [new locus tag: SPG_RS04500 ]
  • pan locus tag?: PNEUPAN001996000
  • symbol: SPG_0893
  • pan gene symbol?: era
  • synonym:
  • product: GTP-binding protein Era homolog

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPG_0893 [new locus tag: SPG_RS04500 ]
  • symbol: SPG_0893
  • product: GTP-binding protein Era homolog
  • replicon: chromosome
  • strand: +
  • coordinates: 862025..862924
  • length: 900
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGACTTTTAAATCAGGCTTTGTAGCCATTTTAGGACGTCCCAATGTTGGGAAGTCAACC
    TTTTTAAATCACGTTATGGGGCAAAANATTGCCATCATGANTGACAAGGCGCANACAACG
    CGCAATAAAATCATGGGAATTTACACGACTGATAAGGAGCAAATTGTCTTTATCGACACA
    CCAGGGATTCACAAACCTAAAACAGCTCTCGGAGATTTCATGGTTGAGTCTGCCTACAGT
    ACCCTTCGCGAAGTGGACACCGTTCTTTTCATGGTGCCTGCTGATGAAGCGCGTGGTAAG
    GGGGACGATATGATTATCGAGCGTCTCAAGGCTGCCAAGGTTCCTGTGATTTTGGTGGTG
    AATAAAATCGATAAGGTCCATCCAGACCAGCTCTTGTCTCAGATTGATGACTTCCGTAAT
    CAAATGGACTTTAAGGAAATTGTTCCAATCTCAGCCCTTCAGGGAAATAACGTGTCTCGT
    CTAGTGGATATTTTGAGTGAAAATCTGGATGAAGGTTTCCAATATTTCCCGTCTGATCAA
    ATCACAGACCATCCAGAACGTTTCTTGGTTTCAGAAATGGTTCGCGAGAAAGTCTTGCAT
    CTAACTCGTGAAGAGATTCCGCATTCTGTAGCAGTAGTTGTTGACTCTATGAAACGAGAC
    GAAGAGACAGACAAGGTTCACATCCGTGCAACCATCATGGTCGAGCGCGATAGCCAAAAA
    GGGATTATCATCGGTAAAGGTGGCGCTATGCTTAAGAAAATCGGTAGCATGGCCCGTCGT
    GATATCGAACTCATGCTAGGAGACAAGGTCTTCCTAGAAACCTGGGTCAAGGTCAAGAAA
    AACTGGCGCGATAAAAAGCTAGATTTGGCTGACTTTGGCTATAATGAAAGAGAATACTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPG_0893 [new locus tag: SPG_RS04500 ]
  • symbol: SPG_0893
  • description: GTP-binding protein Era homolog
  • length: 299
  • theoretical pI: 6.64758
  • theoretical MW: 33666.8
  • GRAVY: -0.261149

⊟Function[edit | edit source]

  • TIGRFAM:
    Genetic information processing Protein synthesis Other GTP-binding protein Era (TIGR00436; HMM-score: 344.3)
    and 21 more
    Genetic information processing Protein synthesis Other ribosome-associated GTPase EngA (TIGR03594; HMM-score: 124.5)
    Unknown function General small GTP-binding protein domain (TIGR00231; HMM-score: 107.8)
    Genetic information processing Protein fate Protein modification and repair [FeFe] hydrogenase H-cluster maturation GTPase HydF (TIGR03918; HMM-score: 86)
    Genetic information processing Protein synthesis tRNA and rRNA base modification tRNA modification GTPase TrmE (TIGR00450; EC 3.6.-.-; HMM-score: 69.1)
    Genetic information processing Protein synthesis Other ribosome biogenesis GTP-binding protein YsxC (TIGR03598; HMM-score: 55)
    Genetic information processing Protein synthesis Other ribosome biogenesis GTP-binding protein YlqF (TIGR03596; HMM-score: 52.5)
    Genetic information processing Protein synthesis Translation factors translation initiation factor IF-2 (TIGR00487; HMM-score: 51.2)
    Metabolism Transport and binding proteins Cations and iron carrying compounds ferrous iron transport protein B (TIGR00437; HMM-score: 50.4)
    Unknown function General GTP-binding protein HflX (TIGR03156; HMM-score: 48)
    Genetic information processing Protein synthesis Other Obg family GTPase CgtA (TIGR02729; HMM-score: 43.2)
    Genetic information processing Protein synthesis Other ribosome biogenesis GTPase YqeH (TIGR03597; HMM-score: 28.4)
    Genetic information processing Protein synthesis Translation factors ribosome small subunit-dependent GTPase A (TIGR00157; EC 3.6.-.-; HMM-score: 21.1)
    translation initiation factor 2, gamma subunit (TIGR03680; HMM-score: 19.9)
    Cellular processes Cellular processes Adaptations to atypical conditions GTP-binding protein TypA/BipA (TIGR01394; HMM-score: 17.9)
    Genetic information processing Protein synthesis Translation factors GTP-binding protein TypA/BipA (TIGR01394; HMM-score: 17.9)
    Signal transduction Regulatory functions Other GTP-binding protein TypA/BipA (TIGR01394; HMM-score: 17.9)
    Metabolism Energy metabolism Amino acids and amines ethanolamine utilization protein, EutP (TIGR02528; HMM-score: 14.9)
    Metabolism Central intermediary metabolism Sulfur metabolism sulfate adenylyltransferase, large subunit (TIGR02034; EC 2.7.7.4; HMM-score: 14.7)
    Metabolism Transport and binding proteins Amino acids, peptides and amines chloroplast protein import component Toc86/159, G and M domains (TIGR00993; HMM-score: 13.5)
    Genetic information processing Protein synthesis Translation factors peptide chain release factor 3 (TIGR00503; HMM-score: 13)
    Metabolism Transport and binding proteins Amino acids, peptides and amines urea ABC transporter, ATP-binding protein UrtE (TIGR03410; HMM-score: 12.5)
  • TheSEED  :
    • GTP-binding protein Era
    Protein Metabolism Protein biosynthesis Universal GTPases  GTP-binding protein Era
    and 1 more
    RNA Metabolism RNA processing and modification tRNA modification Archaea  GTP-binding protein Era
  • PFAM:
    P-loop_NTPase (CL0023) MMR_HSR1; 50S ribosome-binding GTPase (PF01926; HMM-score: 81.9)
    KH (CL0007) KH_2; KH domain (PF07650; HMM-score: 81.7)
    and 15 more
    P-loop_NTPase (CL0023) FeoB_N; Ferrous iron transport protein B (PF02421; HMM-score: 54.4)
    GTP_EFTU; Elongation factor Tu GTP binding domain (PF00009; HMM-score: 44.2)
    Dynamin_N; Dynamin family (PF00350; HMM-score: 39.5)
    RsgA_GTPase; RsgA GTPase (PF03193; HMM-score: 32.5)
    AIG1; AIG1 family (PF04548; HMM-score: 21.7)
    cobW; CobW/HypB/UreG, nucleotide-binding domain (PF02492; HMM-score: 21)
    no clan defined MMR_HSR1_Xtn; C-terminal region of MMR_HSR1 domain (PF16897; HMM-score: 19.9)
    P-loop_NTPase (CL0023) PduV-EutP; Ethanolamine utilisation - propanediol utilisation (PF10662; HMM-score: 18.3)
    Roc; Ras of Complex, Roc, domain of DAPkinase (PF08477; HMM-score: 14.5)
    AAA_22; AAA domain (PF13401; HMM-score: 14.4)
    AAA; ATPase family associated with various cellular activities (AAA) (PF00004; HMM-score: 14.1)
    KH (CL0007) KH_1; KH domain (PF00013; HMM-score: 14)
    P-loop_NTPase (CL0023) Ras; Ras family (PF00071; HMM-score: 13.9)
    ABC_tran; ABC transporter (PF00005; HMM-score: 12.9)
    KH (CL0007) KH_4; KH domain (PF13083; HMM-score: 11.9)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 1.05
    • Cytoplasmic Membrane Score: 8.78
    • Cellwall Score: 0.08
    • Extracellular Score: 0.09
    • Internal Helices: 0
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.007329
    • TAT(Tat/SPI): 0.000955
    • LIPO(Sec/SPII): 0.002174
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MTFKSGFVAILGRPNVGKSTFLNHVMGQXIAIMXDKAXTTRNKIMGIYTTDKEQIVFIDTPGIHKPKTALGDFMVESAYSTLREVDTVLFMVPADEARGKGDDMIIERLKAAKVPVILVVNKIDKVHPDQLLSQIDDFRNQMDFKEIVPISALQGNNVSRLVDILSENLDEGFQYFPSDQITDHPERFLVSEMVREKVLHLTREEIPHSVAVVVDSMKRDEETDKVHIRATIMVERDSQKGIIIGKGGAMLKKIGSMARRDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYNEREY

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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